Cyprinus carpio (common carp): 109112001
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Entry
109112001 CDS
T05134
Name
(RefSeq) zinc finger protein ubi-d4-like isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109112001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109112001
03036 Chromosome and associated proteins [BR:
ccar03036
]
109112001
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109112001
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109112001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
zf_RING_Vps8
zf-C2H2
Lar_restr_allev
zf-C2H2_4
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
109112001
NCBI-ProteinID:
XP_018980562
Ensembl:
ENSCCRG00000007368
UniProt:
A0A8C1A6J9
LinkDB
All DBs
Position
B14:22836976..22847762
Genome browser
AA seq
402 aa
AA seq
DB search
MATAVENIVKVLGEQYYKDALEQCHSYNARLCAERSILMPFLDSQTGVAQSNCYIWMEKR
HRSAGTAPGQLYTYPARRWRKKRRAHPPEDPALVFPPLKAAELELNLKKDVLGPLDGSSL
EALLKGEPLDKRVSTELRPPEDEASLTEGTGTSAASSSTRIRKRILEPEDYLDDLDDEDF
EEETPKRRGKGKSKGRGVGNGKKKMEAAAAAQEDRDKPYACDICGKRYKNRPGLSYHYTH
SHLADEEGEDREEPEMHTPTPREEPKTPKKGPNGLALPNDYCDFCLGDSNMNQKTGQSEE
LVSCSDCGRSGHPSCLQFTAVMMAAVKTYRWQCIECKCCNVCGTSENDDQLLFCDDCDRG
YHMYCLSPPMADPPEGSWSCHLCLALLKDKASIYQSQNPAME
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgccgtggagaatatcgttaaagtgcttggagagcagtactataaagatgct
ctggagcagtgtcacagttataacgcccggctgtgtgccgagaggagcatcctcatgccc
ttcctggactcccagactggagtcgctcagagcaactgctacatttggatggagaagaga
cacaggagtgcaggtaccgcaccaggacagctgtacacgtatcctgctcgccgatggagg
aagaagagaagagctcacccaccagaagaccctgctctggtgtttcctccgctcaaagct
gcggagctggaactgaacctgaagaaagatgtgttggggccgttggatgggagcagcctg
gaagccttgctgaaaggagagccgctggataaaagagtgtccacggagctcaggccgccg
gaggacgaggccagtctgactgaaggcactgggaccagtgcggccagcagctccacacgc
atcaggaagagaatcctcgagccggaagactacttggatgatctggatgatgaagatttt
gaggaggagaccccgaaaagaagaggaaagggaaagtctaagggtcgaggagttgggaat
ggaaagaagaaaatggaagctgctgcagctgcccaggaagatcgagacaaaccgtatgct
tgtgacatctgtgggaaacgctataaaaacagaccaggtttgagttaccactacactcac
tctcacctggctgacgaggagggagaggacagagaagaacctgagatgcacacgcccaca
ccacgagaggagcccaagacccctaagaaaggaccaaacggcctggcgttacctaacgac
tattgtgacttctgcctgggcgactccaacatgaaccagaaaacaggccagtctgaggaa
ctggtgtcctgctctgactgtggacgttcaggacatccttcgtgcctgcagttcaccgcc
gtgatgatggcagctgtgaagacctaccgctggcagtgcattgagtgcaagtgctgcaac
gtttgtggcacatctgagaatgacgaccagcttctgttctgtgatgactgtgatcgagga
taccacatgtactgcctcagccctcccatggcagaccctccagaaggaagctggagttgc
cacctgtgtctggctcttctgaaggacaaggcctccatttatcagagccaaaacccagcg
atggagtga
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integrated database retrieval system
