Cyprinus carpio (common carp): 109112107
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Entry
109112107 CDS
T05134
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109112107
Membrane trafficking [BR:
ccar04131
]
Protein recycling
Others
EARP complex
109112107
Endosome - Golgi transport
Tethering complex
GARP complex
109112107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Motif
Other DBs
NCBI-GeneID:
109112107
NCBI-ProteinID:
XP_042601871
Ensembl:
ENSCCRG00000009540
UniProt:
A0A9Q9XIR2
LinkDB
All DBs
Position
B19:824808..843562
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AA seq
718 aa
AA seq
DB search
MAEALMPAAELSKPGAGSAAAAEAMEKSGCAAAPALNLGDLDLTTDEFILDEVDIHIQAN
LEDDLVKEALRTGVDLRQYSKQVETELQRIEQASIKDYIKESQNIASLHNQITACDSILE
RMEGMLSSFQSDLSSISSEIQTLQQQSVSMNLRLKNRQAVRSQLSQLVDELVVPSTMISV
ILDSPVTEQEFLEQLHELNSKINYAKELSFRETLACSDIQDIVDRLKIKAVSKIREFILQ
KIYSFRKPMTNYQIPQNTLLKYRFFYQFLLANERTVAKEIRDEYVDTMSKIYFSYFKSYS
SRLLKVQYEDVADKDDLMGVEDTAKKGFFSKPSLKSRNTIFTLGQRGAVLSPAELEGPIL
IPHTAQRGDSRYPYETLFRSQHYALLDNGCREFLFLSDFFMVAGNSALDLFNSIMGKTLS
MFLKNLSTYLSDCYDSIAVFLCIHIILRFRAITVKRNIPALDKLGAVLELLWPRFELILE
MNIQSIRNTDPQKLGVLDTRPHYITRRYAEFSSAVVSINQTFPNERTNALLGQLQVEVEN
FVLKMAAEFPSRRDQLIFLINNYDMMLGVLMERAADDSKEVEGFQQLLLARTQEFIEEIL
SPPFGGMIAFVKESEALMEKGQLDKLRNDEARITQLVRGFSSSWKQSVEALSQDVMRSFT
NFKNGTSIIQGALTQLIQYYHGFHKVLSQPTFRSLAVRSELINLHHLMVEVKKHKPNF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgctgatgcccgcagcggagctctcgaagcccggcgctggttctgcggct
gctgctgaagccatggagaagtctggctgtgccgcggctcctgcactgaatctgggggat
ctggacctcaccacagacgagttcatcctggacgaggtggacattcacattcaagcgaac
ctggaggatgatctggtgaaggaggcgctcaggacgggtgtggatctgcggcagtactct
aaacaggtggagacggagctgcagcgcatcgaacaagcatcaatcaaggactatatcaaa
gagagtcagaatattgcctctctacacaaccagatcacagcctgcgactccatactggag
cgcatggagggcatgctgagcagcttccagagcgacctgtcgtccatcagcagcgagatc
cagacgctgcagcagcagtcggtcagcatgaacctgaggctgaagaaccggcaggccgtg
cgcagtcagctcagccagctggtggacgagctggtcgtccccagcaccatgatctctgtg
attctggacagtcctgtgacggagcaggagtttctggagcagcttcacgagctcaacagc
aagatcaactacgctaaagagctcagcttcagagaaaccctcgcctgctccgacatacag
gacatcgtagatcgcctcaaaatcaaagccgtctcaaagatccgtgagttcatcctgcag
aagatctactccttcagaaagcccatgaccaactaccagatccctcagaacacactactc
aagtacaggtttttctatcagttcctgttagccaatgagaggacagtcgctaaggagatc
cgggacgagtacgtggacaccatgagcaagatctacttcagttacttcaagtcctacagc
agcagactgctgaaagtccagtatgaagatgttgcagacaaggatgatctgatgggggtg
gaggacacagccaagaaaggttttttctccaagccttctctcaagagtaggaacacaatt
ttcactcttggccagaggggggcggtactgagtcctgcggagctggaggggcccatactg
atcccacacaccgcccagagaggagactccagatacccgtacgaaacgctcttccgcagt
cagcactacgctctgctggataacggctgtcgagagttcctcttcctctcggacttcttc
atggtggctggaaactctgctctggatttgttcaacagcattatgggaaaaacactcagc
atgttcctgaagaatctgtccacatacctgtcagactgttatgacagtattgcggtgttt
ctctgcattcacatcattctgcgcttcagagccatcacagtcaagaggaacatccccgca
ctcgacaagctgggtgctgtgctggagctgctgtggcccagatttgagctgattttggag
atgaacatccagagcattcgaaacactgatcctcagaaactgggtgtgctggacaccaga
ccacactatatcacacgccgctatgctgaattctcctctgctgtcgtcagtataaaccaa
accttccccaatgagaggaccaacgctcttctgggacagttgcaggtggaggtggagaac
ttcgtgctgaagatggcggctgagtttccctctagacgagaccagctcatcttcctcatc
aacaactacgacatgatgctcggtgtgctcatggagagagcagcggacgacagtaaagag
gtggagggcttccagcagctgctgctggccagaacacaggagttcatagaggagattctt
tctcctccgttcggagggatgattgcattcgtgaaggagagcgaggcactaatggagaaa
gggcaacttgacaaactcagaaacgatgaagctcgtatcacgcagctggtgcggggtttc
tccagctcatggaagcagtccgtggaggccttgagtcaagacgtcatgcgctccttcacc
aacttcaagaacggaaccagcatcattcagggagcgctgacccagctcatccagtactat
catggtttccacaaggtcctctcccagccgaccttccgcagtctggcagtgcgctctgag
ctcataaacctccatcatctgatggtggaagtcaagaagcacaagccaaacttctga
DBGET
integrated database retrieval system
