KEGG   Cyprinus carpio (common carp): 109112694
Entry
109112694         CDS       T05134                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
  KO
K12171  E3 ubiquitin-protein ligase SH3RF [EC:2.3.2.27]
Organism
ccar  Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccar01009]
    109112694
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccar04121]
    109112694
Enzymes [BR:ccar01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109112694
Protein phosphatases and associated proteins [BR:ccar01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109112694
Ubiquitin system [BR:ccar04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109112694
SSDB
Motif
Pfam: SH3_9 SH3_1 SH3_2 RestrictionMunI
Other DBs
NCBI-GeneID: 109112694
NCBI-ProteinID: XP_018981145
LinkDB
Position
39:6913627..6933058
AA seq 645 aa
MRTGRKACWEINMLGDKIGIFPISYVEFNSAARQLIELDKPSEGGGDSSEGPSSSSSGPQ
ANGSQKATGEKKNSKKRHSFTSLTMSHKPCLAPPPQRHSMEISGPVLISSSNPTAAARIG
ELSGGLSSSAPSQVHICTAGLIVTPPPSSPVTTATVFTFPPETSYASIPVDALPPPPPPP
PQSVSSAVGAAAVNAGQRPLPAAGDQSGRHRPTVYVAMFPYTPRKEDELELRKGEMFLVL
ERCQDGWFKGTSMHTGKIGVFPGNYMSPVNRTVSGSSQPKVPLTLCSQAGRGVTIISPSS
APLGATLGSVDPSQPLPVCPNPTPSCPLPAAVVSAAHIPTGQHPKVLMHVTSQMTVNQAR
SAVRTAVCHSQDRPTAAVMPIQSHNPVSYLPSTAVVLQASPVLGSSPGSSSARVGVAMGC
AAASLTPPNVSAASLDSDAMRPVTVVALPVNPKSLGSALNHGVACRLDKDCKREKKGLLK
LLSNKKKLRPSPPSSPTLEAEQSNAMEMPQGAVGPEMAPLSSVAVGHNGRAGTCPMDPEL
SASSSSSNADAVSHRSCSQDNTAPIAPPPRQPCSSLLSMQHDGRPIVCERYRVVVSYPPQ
SEAELELKEGDIVFVHRKREDGWFKGTLQRNGRTGLFPGSFVDSI
NT seq 1938 nt   +upstreamnt  +downstreamnt
atgagaactgggcggaaggcatgctgggagataaacatgctgggagataaaattggcatc
ttccccatatcttatgtagagtttaacagtgcagcacgacaacttatagaactggacaag
ccatctgaaggtggaggagactccagtgaaggaccgtcctcctcttcctcgggcccccag
gccaacggctcccagaaagccactggagagaagaagaacagtaagaagcgtcactccttc
acctctctgactatgtcccataagccctgcctggcccctccaccccagagacactccatg
gagatcagcggccctgttctgatcagctcctccaaccctacagcagcggcccggatcgga
gagctcagcggaggcctgtcctccagcgcaccttcacaggttcacatttgcacagcagga
ctcattgttactcctccaccaagcagtcctgtcaccacagcgacagttttcacatttcct
ccagaaaccagctatgcctctattccagtggatgctcttcctcctccaccacctcctcca
cctcaatcagtgtcttcagctgttggcgctgctgccgtgaatgccggtcagaggccgtta
cccgctgcgggtgaccagagtggccgtcacagacccacagtgtatgtggcgatgtttccc
tacacgccccgtaaggaagatgagttggaattgaggaagggggagatgtttctggtgctg
gagcgctgtcaggatggctggtttaaaggaacatccatgcacactggcaagatcggagtg
tttcctggtaactacatgagtcctgtcaacaggactgtttctggcagcagtcagccaaaa
gttcccctgaccctttgctcccaggctggacgtggtgtgaccatcatcagcccctcctct
gctcctcttggagccaccctggggagtgtcgaccccagtcaaccccttccagtctgccca
aatcccaccccgtcttgcccacttcctgctgctgtagtatcagctgcacatatacccact
ggacagcaccccaaagtgctcatgcatgtgacatcacagatgaccgttaaccaggcacgc
agtgcagtcaggacagctgtgtgtcatagtcaggaccggcctacggcagcagtgatgccc
atccaatcccacaatcctgtgtcctaccttcctagcacagctgtggttcttcaggcgtca
cctgtcctcggctccagcccgggatcctcctcagccagggtcggcgtggctatgggctgt
gccgccgcctccttgacccctcctaatgttagcgctgcttctttggacagtgatgctatg
agacctgtcactgtggtagcacttcctgtgaacccaaaatctctcggttcagccttgaat
catggtgttgcttgtagactggataaagactgcaagagagaaaagaaaggcctactgaaa
ctgctgtctaataaaaagaagctccgcccatctcccccatcctcgcctacactggaggcg
gagcagtctaatgccatggaaatgccccagggggcagtcggacctgaaatggctccactc
agctcagtggcagtaggacacaacggccgtgctgggacctgtccgatggatcctgagctc
tctgcatcctcatcttcatcgaacgcagatgcagtgtcacacagaagctgctcccaggac
aacactgccccaatcgccccgcctccacgacagccatgctcctccctcctctccatgcag
catgacggccggccaattgtttgtgaaaggtaccgtgtggtggtgtcctaccctccccaa
agcgaagcagagctggaactcaaggagggagacattgtgtttgtgcacagaaaacgagag
gacggctggtttaaaggaacactacagagaaacggccgaaccgggctgtttcccggcagc
tttgttgacagtatctaa

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