Cyprinus carpio (common carp): 109112823
Help
Entry
109112823 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha-like
KO
K04838
voltage-gated sodium channel type V alpha
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
109112823
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109112823
Ion channels [BR:
ccar04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109112823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
109112823
NCBI-ProteinID:
XP_018981263
LinkDB
All DBs
Position
4:9994415..10030389
Genome browser
AA seq
1747 aa
AA seq
DB search
MAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLLLKTIVSALIQSVKKLADVMILSVFC
LSVFALIGLQLFMGILRQKCVRSPAHCINSTYPGNGSFVCNNKTWLSIKDFLTNEDNFYK
IEGSKDALICGYSSDAGKCPDGFDCLKTGRNPNYGYTSFDTFGWAFLALFRLMTQDYWEN
LYHQTLRSAGKTYMIFFVLVIFLGSFYLVNLILAVVAMAYEEQNQATIAEAWAKEREFQL
AMEQLRKEQSALAKQRRKEAEMALAADLSPSSFSRKDSVKCRSRTRSHRTLSEEMEDNFL
PKFDPFDEKPAHPFLATLSSHPLSTRRGSQLSTFTFRPRNSSEADFADDEHSIHGDGRSR
AGSMATPWNKCRTGSIRSHSSQVFMPTFTLNGRLNISLDQNGITSIGPHTLTSVPAFSME
KVREDTEPVCKIEQTSPAAKLTVDMQEEVPPPRRKRGLSSVSFFSDVIDELEEAHQKCPP
CWYEFAKKYLIWTCSPAWLRVKEGLKVMVMDPFLDLAITICIVLNTLFMALEHYPMTDEF
NSMLSVGNLVFTGIFTAEMVLKIFALDPYYYFQQGWNIFDGIIVCLSLMELGLSNVEGLS
VLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNY
QDCVCKISYDCTLPRWHMKDFFHSFLIVFRVLCGEWIETMWDCMEVAGQPLCILVFMLVM
VIGNLVVLNLFLALLLSSFSSDNLSAPDDDGEMNNLQIAISRIHFGFSWLLDAIKDLFSG
NLAWHRQKAKEVQVSLKENHTECNGGLGSLEQHGGKYITPEGEDSYMTNPNLTICVPIAP
GESDVEFPEEEEEEEEETESSEDEDQKPEVVSLSEGSTVDLRKPGEDEEEYSEMGDEGMD
PEECFPEFCMQRCKCCNINTTRGLGQAWWRLRKTCYQIVEHSWFETFIIFMILLSSGALA
FEDIYIEQRKVVKVVLEYADKVFSYIFVLEMFLKWIAYGFKKYFTNYWCWLDFLIVDVSL
ISLVANSLGYSDFGAIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLI
FWLIFSIMGVNLFAGKFGKCVNRTGYIHSVTLVNNKSDCQSMNDTQFYWTKVKVNFDNVG
LGYLSLLQVATFKGWMEVMYAAVDSRGVEEQPVKEINLYMYLYFVIFIIFGSFFTLNLFI
GVIIDNFNQQKRMIGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPVNILQGFFFDLVS
KQAFDITIMMLIILNMITMMVETDEQSARMETILNNINLTFIVIFTTECLIKIFALRCYF
FTISWNIFDFVVVILSIVGKCTTLQSGIVLADIIEKYFVSPTLFRVIRLARIGRVLRLIR
AAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMANFAYVKKQGGIDDMFNFETFG
NSMICLFQITTSAGWDNLLDPILNNSPEECSSSYINTGTNTKGNCGNPSVGIAFFVSYII
ISFLIVVNMYIAIILENFSVATEESTEPLSEDDFEMFYEVWEKFDVEATHFIEYSKLSSF
ADSLSEPLRIAKPNKIKLISMDLPMVSGDRIHCLDILFAFTKRVLGETGEMDALKQQMEE
KFMMANPSKISHEPITTTLRRKQEEISAFLIQRAYRRHLIRRQMKQASYLYRHINQGTQA
RWLEEDDAPEREGLIASMIKEHYGPKKGPLSYDAVQRVLVTXFKMLKSDSQSNEPHKSEE
TYNETFL
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatgtgacagagtttgtggacctcggcaatgtatcagcattacggacgttcaga
gttctgcgtgctttaaaaactatatcagtgatcccaggacttcttttaaagaccattgtc
agtgctctcatccagtcggttaaaaagctagcggacgtgatgatcctctctgttttctgt
ctcagtgtcttcgctctgattggtctacagctctttatgggaatcctacgacagaagtgt
gtccgtagccccgcccactgcattaactccacctaccctggaaacgggagcttcgtttgt
aacaacaagacctggctctccatcaaggacttcttaactaatgaagacaatttctacaaa
attgaaggatccaaggatgccttaatatgtggatacagcagcgatgctgggaagtgccct
gatgggtttgactgtttaaaaacaggtcggaacccaaactacggctacacaagctttgac
acctttggctgggctttcctggctctcttcagactcatgacacaagactactgggaaaac
ctctaccatcagactttacggtcagcagggaagacctacatgattttctttgtgctggtg
atatttctgggttcgttctacctggtgaacttgatcctggctgtcgtggccatggcatat
gaggagcaaaaccaagcgaccatcgcagaggcctgggcaaaagaaagagagtttcagctg
gcaatggaacagctgcgcaaggaacagagtgcattagcaaaacagcgcagaaaggaggct
gagatggccctggctgcagatttatctccgtcatctttctctcggaaagactctgtgaaa
tgccgaagtagaacgagatcccaccgaacactttcagaggagatggaggacaactttttg
ccaaaatttgacccatttgatgaaaaaccagctcaccctttcctagccactctctcctcc
catcctctgagcactcgtcgaggaagccagctcagtacctttaccttccggccgcgcaac
agttcagaggctgactttgcagatgacgaacacagcatccacggtgatgggcggagccga
gcgggttccatggcgacgccgtggaacaagtgtcgtacgggcagcatccggagtcactca
tcgcaggtgttcatgcccaccttcaccctcaatggcagacttaacatttccctggaccag
aatggcatcaccagcatcggcccgcacaccctgacctctgttccagcgttcagcatggag
aaggtcagggaggacacggagccagtgtgtaagattgagcagacctctccagctgccaaa
ctgactgtcgacatgcaggaggaagtcccgcctcctcgcaggaagagaggactgagctct
gtcagcttcttcagtgacgtcatcgacgaacttgaagaggcccatcagaaatgtcctcca
tgctggtatgaattcgcgaagaagtacctgatttggacatgttctcctgcctggctgaga
gtgaaggaagggcttaaagtcatggtgatggaccctttcctggaccttgcaatcaccatt
tgcattgttctcaacacattgttcatggcgctagagcactatcccatgactgatgaattc
aacagcatgctgagtgttggaaacctggtgttcactggaatcttcacggcagagatggtg
ctgaagatttttgctctggatccatactattactttcagcaaggctggaacatctttgat
ggaattattgtttgtttgagtctgatggagttgggcctttccaacgtggagggtctgtct
gtcctccgctcgttcagactgctgagagtttttaaacttgcaaagtcatggcccaccctc
aacacgctgataaagatcatcggtaactctgtgggtgccttgggaaacctgacgctggtc
ttggccatcatcgtcttcatcttcgctgtggtgggcatgcagctgtttggaaagaactat
caggactgcgtgtgtaagatcagctacgactgcacccttcctcgctggcacatgaaggac
ttcttccactcgttcctcatcgtgttcagggtcttgtgcggagagtggatcgagaccatg
tgggactgtatggaggtggccggacagccgctttgcattctggtcttcatgctggtcatg
gtcataggaaacctagtggtgttgaatctgtttctggcactgttgttgagctccttcagc
tctgataacctgtcagcacccgacgatgacggagaaatgaacaaccttcagatagccatc
agtcgaatccacttcggtttctcttggctgctggacgccatcaaagatctcttcagtggg
aacctggcgtggcacagacagaaggccaaagaggtgcaggtgtcattgaaagagaaccac
actgagtgcaacggcggcttgggaagtttagagcagcatggagggaagtacattactcca
gaaggagaggacagttacatgaccaatcccaacctcaccatctgtgtgcccattgcacca
ggagagtcagacgtggaattccctgaggaagaggaggaggaggaggaggagacagagtca
tcagaggatgaagatcagaaaccggaagtcgtcagcctctctgaaggaagtactgtggac
ttgaggaagcctggggaagatgaggaggaatattctgagatgggagatgaaggcatggat
ccagaagagtgtttccccgagttctgtatgcagcgctgtaagtgttgcaatatcaacaca
acgagaggtctgggtcaagcgtggtggaggctgaggaagacgtgctatcagatagtggag
cacagctggtttgagaccttcatcatcttcatgatcctcctcagcagtggagctctggct
tttgaagacatttacattgaacagaggaaggtggtgaaggtggtgttggaatatgctgat
aaggtgttcagctacatctttgtgctggagatgtttctgaagtggattgcatatggcttt
aagaaatacttcactaactactggtgctggctggacttcctgattgtggatgtgtctttg
attagcttggttgctaactctctgggctactcagactttggggccattaaatctttgagg
actctcagagctctgaggcccttgagggccctgtctagattcgaaggaatgcgggtggtg
gtgaatgcactgatcggggccatcccatccatcatgaacgtactgctggtgtgcctgata
ttctggctcatatttagcatcatgggtgttaatctattcgctgggaaattcgggaaatgt
gtcaacaggacaggatacattcacagtgtaaccctggtcaacaacaagagtgactgccag
tccatgaatgacacccagttctactggaccaaagtgaaagtcaactttgacaatgtgggc
cttggatacctctcacttctgcaggtggcaacattcaaaggctggatggaagtcatgtat
gctgctgtcgattcccgtggagttgaggagcagcccgtcaaagagataaacctctacatg
tacctctactttgtcattttcatcatctttggatccttctttaccttaaatctgttcatc
ggtgtcatcatcgataacttcaatcaacagaaaagaatgataggtggccaggatatattc
atgactgaagagcagaaaaagtactacaatgcaatgaagaaacttggatcgaaaaagcca
cagaagccaattccaagaccagtgaacattttacaaggattctttttcgacttggtgtcc
aagcaagcctttgacatcactatcatgatgctcattattctcaacatgataaccatgatg
gtcgagaccgatgaacaatctgctcgcatggagaccatcctcaataacatcaacctgact
ttcattgtcatctttaccaccgaatgcctcatcaagatatttgccctccgctgttatttc
ttcaccattagttggaacatatttgactttgtagtcgttattctgtccatcgttggtaag
tgcacgactttacagtctggaattgtccttgctgatataatagaaaaatactttgtgtcc
ccaactctgtttcgagtgatccggttggcaagaataggacgagttctcagactaatacga
gcagctaaaggaataaggacgttactttttgccttaatgatgtcgctgccggcattgttc
aacattggcctcctgctcttcctggtcatgttcatctatgccatttttggcatggcaaac
ttcgcctacgtaaagaagcagggcgggattgatgacatgttcaacttcgaaaccttcggg
aacagtatgatctgccttttccagatcaccacatcggctggttgggataacctactggat
cccattctcaacaactctccggaagaatgcagctcgagttacatcaacaccggaaccaat
accaagggcaactgcggcaacccctcagtagggatcgcttttttcgtcagctacatcatc
atttccttcttgatcgtggtcaacatgtacatcgccatcattctggagaacttcagcgtg
gccaccgaggagagcactgaacctctgagcgaggacgactttgagatgttctacgaggtt
tgggagaagttcgacgttgaggccacacacttcatcgagtactccaaactctcgagtttc
gccgacagcctttccgaacctctgaggatcgccaaacccaacaaaatcaaactcatcagc
atggatctacctatggtcagcggtgacaggatccattgcctggacatcctgttcgccttc
accaagcgggtccttggggagacgggagaaatggatgctttgaagcagcaaatggaggag
aagttcatgatggcaaacccttccaagatatcccacgagcccatcaccaccacactgcgg
cgcaagcaggaggagatttcggcattcctgatccagcgcgcctaccggcggcaccttatt
agacggcaaatgaagcaggcgtcttacctgtacaggcacataaaccaaggcacgcaggca
cgctggttggaagaggacgacgctccagagcgggaaggactcatagcgtcaatgattaaa
gagcactacggtcccaagaaggggccgctgtcctatgatgctgtacaaagggtcctagtg
accnnattcaagatgttaaaatctgactctcaatccaatgagcctcataaatcagaagag
acatataacgagacctttctttag
DBGET
integrated database retrieval system
