Cyprinus carpio (common carp): 109112916
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Entry
109112916 CDS
T05134
Symbol
nup58
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin p58/p45
KO
K14307
nucleoporin p58/p45
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109112916 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109112916 (nup58)
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109112916 (nup58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Nup49_C
PSY3
Spectrin
DUF6444
COG2_N
CCDC-167
T3SS_basalb_I
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
109112916
NCBI-ProteinID:
XP_042570371
Ensembl:
ENSCCRG00000049298
UniProt:
A0A9Q9VT99
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All DBs
Position
A24:complement(17236013..17245721)
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AA seq
589 aa
AA seq
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MSGFNFGSSTLGSTGTGGGFSLGAATSAPAAGTGGFGFGGFGTPTSTPAATSTTSKKPAT
GFTFNTPAASGAAASTTGLTLGSLTTSTAASTGFSLGFGKPAASATPFSLTATTSAATGT
GLTLGSILTSTAPQTSSTGFSLNLGGAATTSSAPASGFSFGSSLFSNPSLTGLGQSTLGG
PLSLGGLVSTSIATTSAPAPSLGLGGVDFSTSSEKNTDKLSSTRPEDSKALKDENLPGPI
CQDVDNFQKFVKEQKQVQEEISRMSSKAILKVQEDIKTLRQLLSVCASGLQRNSLSIDKL
KLETSQELKNADIALRTQKTPPGLQHENTCSSTCKNLYFRALVEQFEVQLQQYRQQIEEL
ENHLTTQSTTSPHNPSDLSQAMQKLYQTFVALAAQLQGVHENVKTLKHQYLGYRRAFLDD
STDIFESKRVAGKKWQSSPNVTTGPAPFGSVPNAAAVAMAATLTQQQQPAPGPQAPLGAS
FGTPFSSGIGTSMGSSSLGAFRSGPGFGGVATGGLSFGFSSSKPSGGSLSAGVFVSNTSG
FNFSNPGINASAGLTFGVSNTQTPGFGTGSARMTIAASKKPPENKKGKR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtccggctttaacttcggctcaagcaccctcggctccaccggcaccggcggagggttc
tcactgggagccgcgaccagtgcacctgctgcaggtacgggtggatttggatttggaggg
tttggcacgccaacatccacaccggccgccaccagtaccacctcaaaaaaaccagcaact
ggattcacctttaacacacctgctgcctcaggggctgctgcatccactacaggccttact
ttagggagtcttaccacctctaccgctgcttccactggattcagcctgggcttcggaaag
ccagctgcctccgctacacctttctcactcacagccaccacctctgcagctacaggcaca
ggcctgactctgggatccatcctgacctccacagcccctcagaccagctccactggcttc
tccctcaacttaggaggagctgccaccacttcctccgctcctgcctcaggcttttccttt
ggttccagtctcttttccaatccctccttgacaggtttgggacagtccactttaggtgga
cctctgagtctgggtggtttagtctctacctctatcgcgaccacctccgcacctgcgccc
agtctcggcctgggtggagtagacttcagtacttcctctgaaaaaaatactgacaagtta
tccagcaccagaccagaagacagtaaagccctcaaagatgaaaacctgccaggtccgatc
tgtcaagatgtggacaactttcagaagtttgtcaaggaacagaagcaagtccaagaagag
atcagcaggatgtcttccaaagccattctcaaagtgcaagaggacatcaagacactcaga
cagctcctgtccgtctgcgccagtgggctgcaaagaaattcactctccatagacaaactg
aagttggaaacttctcaggaattgaagaatgctgatatcgcacttcgcacccaaaagacc
cctcctggactccaacatgagaacacatgcagttctacttgtaaaaacctttatttccgg
gctctggtggagcaatttgaggtgcagttacagcagtaccgtcagcagattgaagaactg
gagaatcatctgaccacccagagcaccacatcaccacacaacccctcagatttgtcccag
gccatgcagaagctctaccagacgtttgttgcacttgctgcgcagttgcagggagttcat
gagaatgttaagactctcaaacatcagtatctgggctacagacgagccttcctcgacgac
tccactgacatattcgagtcaaaacgtgttgctggaaagaaatggcagagctctccgaac
gtcaccactggccccgcaccctttggcagtgttcccaacgcagcagccgttgccatggct
gccactctcactcagcagcagcagccggctccaggaccacaggcgcccttgggggcaagt
tttggcactcccttttcctcgggtattggcactagcatgggctcatccagcctcggagca
tttagaagcggccctgggtttgggggcgtggcaacaggaggtttgtcgtttgggttttcc
tctagcaagccatctggagggagcctgagcgcaggtgtgttcgttagcaacacctctggc
ttcaacttcagtaaccccggcatcaatgcatcagctggattgacctttggggtttccaac
acacaaactcctggatttgggacaggatcagccagaatgaccattgctgcatcaaaaaaa
cccccagaaaataaaaagggcaagagataa
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