Cyprinus carpio (common carp): 109112960
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Entry
109112960 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 24-like
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccar01002
]
109112960
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109112960
Enzymes [BR:
ccar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109112960
Peptidases and inhibitors [BR:
ccar01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109112960
Ubiquitin system [BR:
ccar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109112960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_UBL1
UCH_1
DUF3517
Mrr_cat_2
UBA
Motif
Other DBs
NCBI-GeneID:
109112960
NCBI-ProteinID:
XP_042633167
Ensembl:
ENSCCRG00000002958
UniProt:
A0A9Q9Z6X5
LinkDB
All DBs
Position
A20:complement(9700221..9767976)
Genome browser
AA seq
2586 aa
AA seq
DB search
MMETEEEQHMTTLLCMGFPDPVAIRKXLRLAKNDINEAVALLTNESPGLGYGYEPMESGP
SPSSGLSGDGESSGRTGTGGFDPPPAYHDVVESEKSNDENGNCSGNSMEFPTTNLYELES
RVFTDHWSIPYKREESLGKCLIASTCLARLGLADADENCKRFVDRCMPEAFKKLLTSSAV
HKWGTEIHEGIYNMLMLLVDLVAERVKQDPIPIGLLGVLTMAFNPDNEYHFKNRMKACQR
NWAEVFGEDSMFAVSPSSSYQKEPHGWLVDLVNRFGEMGGFTAIQCKLNQEEMEIGCVSA
LVQPLGVCAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPELLSAIKLLCM
RFQRELVNVVDDLRLDILLRMLKTPHFSAKMNSLKEVTKLIEESTVSKTVKNAIDTDRLL
DWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELSKIWKIQAGQSSTVIENI
HTIIAAAAVKFSFDQLSHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSEATTGKVLE
VLWELAHLPTLPAXLVQQALEEHLTILSDAYAVKETIXRNYIIKCIEDIKKMQIQEDSKS
PSETQVSFLTGTWGKKKPSSLAKSSQQTNPQTVWVVPALRQLHEITRSFIKQTYQKQDKS
IIQDLKKNFEIVKLITGSLVSCHRLAVSVAGSNGLSGSTLVDGRYSYQEYLEGHLKFLAF
FLQEASLYLVWNRAKEIWECLVSGMDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKIL
KLEPYEITMNGFNLFKTFFENVNLSDHRLKRQGTQLCVERLDLAGMDFIWRIAMESPDED
IANEAIQLIITYSYINLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRAT
KMLTATAMPTVATSVQSPSRSSKLVIIERLLLLAERYVITIEDLYSVPRTILPHGASFHG
HPVTLHITYESTKDTFTLEGHSNETIGSIRWKIAEQLSCPVDNVQIFANDSMLTMNRDQK
LLNQLGFSDEQSLTVKSSGTGTPSGSSADSSASASSSSSGVFNSAYALEQEKSLPGVVMA
LVCNVFEMLYQLANLEEPRITLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQKTLFT
LGSGSQASKSPSLSSKQQHQQSAASILESLFRSSAPGMSTFRVLYNLEVLSSKLMPTSDD
EMAKTSVKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQA
MPSILDEELSKEGLDTLSSRPFRNAGRQSGRQLSVCGTPEKSSYRQVSMSDRSSIRVEEI
IPAARVAIQTMEVGDFTSTVACFMRLTWAAAAGRLDLVGSSQPIRETTNSLLPLGVRSRV
SSTGSNCSSSSEGEVTTLQAGICVKQLFVSIKDTIIAREALSLLVTCLQLRCQQLSSFYT
LPSVNDFIIDILLGSPSGEIRRVACDQLYTLSQSDTSAYPDLQKPNLFLLKVVLTAQLPL
WSPTSVMRGVNQRLLSQCAEYFDLRCQLLDDLTTSEMEQLQIGPAAMLEDEISWLDNFEP
TWTNELETSEADNILLAGHLRLIKTLLSLCGNEKEQFGPSLIQQLLDDFLFRASRIILNS
DSSSSTTASIHDFHPKCSTVSSRLAAYEVLVMLADSSLTNLQLITKELQSMHHQSDPLCV
TLYLAVWLSCQLKENPEESVFCQVQSLFGHLMESKLQYYIPENFWKIFKMWNKELYVREQ
QDAYEFFTSLVDQLDEHLKKIGREQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLG
VTSCQSLEISLDQFVRGEVLDGSNAYYCEKCKEKRTTVKRTCIKSLPSVLVIHLMRFGFD
WESGRSIKYDEQIRFPWVLNMEPYTVSGMARQDSSADHGENGRGGEAGSGGSPRKKVTIS
ENYELVGVVVHSGQAHAGHYYSFIKDRRGSSRGRWYKFNDNVVEEFDMNDETLEYECFGG
EYRPKVYDQSNPYPDVRRRYWNAYMLFYQRISDQNSPVLPKKSRVSIVRQEAEDLSLSAP
SSPEISPQSSPRPPRANNDRLTLLTRLVKKGEKKGLFVEKMPARIYQMVRDENLKFMKNR
DVYNSDYFNFTLSLASVNATKLKHPSYQAMAKTSLQLSVQFLFHTYLRTKKKLRVDTEEW
IATMEVLLSKSSEACQWMVQYLVAPEGREIIKICLLECSVREVRVVVANILEKTLESALY
FQDAGLDCLLDMLLSLLDKDVPDNCKNCSQYFSLFSNFAQRGCGPCQLLLKHSAFRRMLV
FLLGPNRQNNQHRRWSSAQAREFLHLHNTLALIVMHTDLMSQRTESQGVFKLASSGLVAP
SSPLMPLHPDVNMFLFKAEGQVYLMEVMFAMRELSGPLSFLIEMITYCSFCNEPFSLGVL
HLLKNHLETAPPHELKNVFQMLLEILTVEDPLQSQRLKYAFESEKGLLALMHQSNNVDSS
RCYQCVKFLVTLAQKCSPAKDYFKELSGHWSWAVQWLQKKMSEHYWTPQSNVSNETSTAK
TFQRTISAQDTLAYATALLNEKEQSGSSNGSDGSPANENSDRSLRQGSESPMMLGDSRSD
LEDVDP
NT seq
7761 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacagaggaggagcagcacatgaccacgctgttatgcatgggcttcccagac
ccggtggccatccggaaanngctccgcctggccaaaaacgacatcaacgaggctgtagcg
ctgctcaccaacgaaagcccgggactcggatacggctacgagccgatggaaagcggccca
tccccgagctccggcctcagcggagacggcgagagcagcgggcgcacgggcaccggaggg
tttgatcctccgcctgcgtatcacgatgtcgtggaaagtgagaagagtaatgatgagaac
ggaaactgctctgggaacagtatggagtttcccaccactaatctgtatgagctggagagc
agagtgttcactgatcactggtccatcccatacaagagagaggaatcgctcggcaagtgc
ctcatcgcctccacctgcctggccagactgggcctggccgatgcagatgagaactgtaag
agatttgttgaccgctgcatgcctgaagccttcaaaaagttgctgacgtccagtgcggtg
cacaagtggggaacagagattcatgagggcatctacaacatgttgatgctgctggtggat
ctggtcgcagagagagtcaaacaggatccgatacccattggcctcttgggagttctcact
atggcttttaaccctgataatgagtatcactttaagaatcggatgaaggcctgtcagagg
aactgggcagaagtgtttggagaggacagcatgttcgctgtttctcccagctccagctac
cagaaggaacctcacggctggctggtggacttagtgaatcggtttggagagatgggaggc
ttcacagcaattcagtgcaagctcaaccaggaagagatggagattgggtgtgtatcagct
ctggttcagccgctcggtgtgtgtgcagaatacctgaactccagcctggtgcagcccatg
ctggacccagtcatccataagatgataacatacgtgcagaacctggaggagaaagacctg
aaagacaagcgtttggtgagtattccagagctcttgtcggccattaagctcctctgcatg
cgtttccagcgggagctggtgaatgtcgtggatgaccttcggctggacatccttctccga
atgctcaagacgccccacttcagtgccaaaatgaactccctcaaagaggtcacgaaactc
attgaggaaagcacagtttccaagactgtgaagaacgccatcgacacagaccgactcctg
gactggctggtagaaaactcagttctgtcaatagctttggaaggaaacattgaccaggcc
cagtactgtgacagaataaagggaatcattgagctgttgggcagtaagctctcattggat
gaactctccaaaatatggaaaatacaggctggtcagtcctccactgtgattgagaacatc
cacaccatcatcgccgctgctgccgtcaagttcagctttgaccagctcagccacctcttc
gtcctcatacagaagagctgggaggttgagagtgatcgtgtgagacagaagcttctgagt
ctgattggacggattggcagggaagctcgctctgaggcaaccacaggaaaggtgttggag
gtattgtgggagttggcgcatctccccacccttcctgccnnactagtacagcaggccctg
gaagaacacctcaccatcctcagcgacgcatacgctgtcaaagaaaccatanngaggaac
tacatcatcaaatgcatcgaagatatcaagaagatgcaaatacaggaggattcaaagtct
cccagcgagacacaggtctcttttcttactggcacctggggcaagaagaaaccgagctca
ttggctaaatcgtctcagcagactaaccctcagacggtgtgggtggttccagccttgcgg
cagcttcatgagattacgcggtcttttatcaaacagacctaccagaaacaggacaagagt
ataatccaggacctgaagaagaactttgagatagtgaagctgatcacaggctctctggtg
tcatgtcatcgcttggccgtgtctgtcgctggatccaatggtctttctgggtccacgctg
gttgatgggcggtactcctatcaggagtatttggagggtcacttgaagttccttgcattc
ttcctgcaagaggccagtctgtacctggtctggaatagagccaaagagatctgggaatgc
ttggtgtctggcatggatgtgtgcgagctggatcgagagatgtgtttcgaatggttcact
aagggacagcatgatctagagagtgatgttcaacagcagctctttaaagagaagattctc
aagctggagccttatgagatcactatgaacgggtttaacctcttcaagaccttctttgag
aatgtgaacctcagtgatcaccgtctcaaacggcagggaacacaactgtgcgtggagcga
ttggatctggctgggatggacttcatttggaggatcgcgatggaatctccagacgaggac
atcgctaatgaagccatacagctcatcattacttacagctacattaacctcaaccccaaa
atgaagaaggactcagtatctcttcataagaaattcatagctgactgctataagagattg
gaggctgctagctctgcgttgggcggcccgaccctcacacatgctgttacccgggcaacc
aagatgctgacagccactgctatgccaacggtcgccacatcagtgcaatctccatccagg
tccagtaaactagttatcattgagagacttctgttattggcggagcgttatgtcatcaca
atagaggacctgtattctgttcctcgaactattctacctcatggagcgtctttccacggc
catcctgtcacacttcacatcacttacgaatctaccaaagacacattcaccttggagggc
cacagcaacgagaccataggcagcatcagatggaagatagccgagcagctcagctgtccg
gtggacaatgtgcagatatttgccaatgacagcatgttgacaatgaatcgtgaccagaag
ctgttgaatcagctgggtttctctgatgagcagagtctgacggtgaagagctcaggaaca
ggcactccatcaggcagttcagcggacagctccgcctcggccagctccagcagcagcggg
gtctttaactctgcgtatgctttagagcaggagaaatctcttcctggtgtggtcatggcg
ttggtgtgtaatgtctttgagatgctttatcagctcgccaatttggaggaacccagaata
actttgcgtgtcaggaagttgttgctgcttatcccgactgacccagaggtgcaggacgcc
cttgataactttgtgccaaaagagtccagcgtctggagtcaccagaaaactctgtttacg
ctggggtctggttctcaggcctcaaagtctccatctctgtccagtaaacagcagcaccag
cagagtgcagcgtccatcctggagtctctgtttcgttcctctgcccctggcatgtctacg
ttcagagtgctttataacctggaggtgctgagctccaagctgatgcccacatctgatgat
gaaatggcaaagaccagtgttaaatctttctgtgagaacttccttaaagcaggaggtctc
agtctggtggttaacgtcatgcagagagactccatcccctctgaggtggactacgagacc
agacagggagtctattccatctgtctgcagctggccaggttcctgctggtagggcaggct
atgcctagtattctcgatgaggagttgagcaaggaaggtctggacactctgtcctctcgg
ccgtttcgtaacgccgggcggcagagcggccgacagctctccgtctgcggaactccagag
aagtcctcctacaggcaggtgtctatgtctgacagatcctccatcagagtggaagaaatc
atcccggccgcccgtgtcgccatacagacaatggaggtgggagacttcacatccacagtg
gcgtgtttcatgaggctcacctgggcggcagctgcaggccgattggatctagttggaagc
agccagccaatcagagagacgactaactcgcttctcccgctgggtgttcgcagcagggtc
agcagcacaggaagtaactgcagctcgagcagtgagggagaggtcaccacgttgcaggct
gggatatgcgtcaaacagctgtttgtgtccatcaaagacactattattgcaagagaagca
ctctctttactcgtcacatgccttcagctacgctgccaacagctatcttcattttacact
ctgccttctgtgaatgatttcatcattgatattctgctggggtcgcccagtggagagatc
cgacgtgtagcgtgtgatcagctgtacactctcagtcagtcagacacctctgcataccct
gacctccaaaagcccaacctcttcctgttgaaggtggttctgacagcccaacttcctctc
tggtcccccaccagcgttatgaggggcgttaaccaaaggttgctttcacaatgcgccgag
tattttgatctgaggtgccaactactggatgacctgaccacatcagaaatggagcagctt
cagattggccctgcggccatgctagaggacgagatcagctggcttgataatttcgagccc
acttggaccaacgagctggagaccagcgaggcagacaacatcctgctggccggacacctg
cgcctcattaaaaccctgctgtccctctgcggcaatgagaaagagcagttcggtccttct
ctgatccagcagctgttggacgacttcttgttcagagcgtcacgaatcatcctgaacagt
gacagctcatctagcacgacagcatctatccacgactttcacccaaagtgcagtacggtc
agcagtcgtctggcggcgtacgaggtgctggtcatgttggccgacagctctcttactaac
ctgcagctcatcactaaagaactgcagtccatgcaccaccaatctgacccgttgtgtgta
acattataccttgctgtgtggctgtcttgtcaattgaaggaaaacccagaggagagtgtg
ttctgtcaggtgcagtctctgtttggtcacctgatggagagcaaactacagtactacata
cctgagaacttctggaagatatttaagatgtggaataaagaattatatgtacgagaacag
caggacgcttatgagttcttcaccagtctggtggatcagcttgatgaacatctaaagaaa
atcggtcgagagcagatcttcaaaaacacattccagggcattttctctgatcagaagata
tgtaaagactgtccacacaggtacgagcgcgaggagacgttcatggctctgaacttgggg
gtgacatcctgtcagagtctggagatctctctcgatcagttcgtcagaggagaggtcctg
gatggcagcaatgcttattactgtgagaagtgtaaagagaagcggaccactgtgaagcgg
acctgtataaagtctctgcccagcgtgctggtcatccacctcatgcgattcggctttgac
tgggaaagcggccggtccatcaaatacgatgagcagatccgattcccctgggtgctgaac
atggagccgtacacagtgtcaggaatggcccgtcaagattcaagtgcagatcatggagag
aacgggagagggggcgaggccggatccgggggatcgcctcggaagaaggtcaccatctct
gagaactacgaacttgtgggagtggtggtccacagcggacaggcccatgcaggacactat
tactcattcatcaaagaccgtcggggtagttcacgaggacgctggtataagtttaacgac
aatgttgttgaagagtttgacatgaacgatgagactctggagtacgagtgtttcggagga
gagtacagacccaaagtttatgaccagtctaacccctacccggatgtgcggcggcgctac
tggaacgcctacatgctgttctaccagcgcatcagtgaccagaactcccccgtcctgccc
aaaaagagtcgagtcagcatcgtgaggcaggaggcagaggatctctcactgtcagcgcca
tcctctccagagatctcaccccagtcctccccacggccaccccgagccaacaatgaccgc
ctcaccctgctcacacgcttggtcaagaaaggagagaagaagggtctgtttgtggaaaag
atgcctgctaggatctatcagatggtgagagatgaaaatctgaagttcatgaagaacaga
gacgtttacaacagtgattacttcaacttcacactgtctctggcgtctgtcaacgcgacg
aagttaaagcatccatcgtatcaggccatggccaaaaccagcctgcagctgtctgtccag
ttcctcttccacacttatctgcgcactaaaaagaaactcagggtggacacagaggagtgg
atcgctaccatggaggttttgttgtccaagagtagtgaggcgtgtcagtggatggtccag
tacctggtggcacctgaaggacgggagatcatcaagatctgtctgttggaatgcagtgtg
cgggaggtccgtgtcgtggtggccaacatcctggagaagaccctggagagcgctttgtac
ttccaggacgctgggttggactgtcttttggacatgctgctctctctattggataaggat
gttcctgataactgcaagaactgctctcagtacttcagcctcttcagtaactttgctcag
aggggctgtgggccatgtcagctgctgctgaaacattctgcttttcgtcggatgcttgtc
ttcctcctgggacccaaccggcaaaacaaccagcaccggcgctggagttcagcacaggct
cgtgagttcctgcatcttcacaacactctggccctgatcgtgatgcacacagacctcatg
tctcagaggacggagtctcaaggagtgttcaagctcgcttcatcaggactggtggctcca
tcttcacccctcatgcctctacatccagacgtcaacatgtttctcttcaaagcagaagga
caggtgtatctcatggaggtgatgtttgccatgcgtgagttgtctggcccattgtcgttt
ctcatcgagatgatcacatattgttcgttctgtaacgaacctttctcactgggagtccta
cacttactcaagaaccatctggaaacggctcctcctcacgaactgaagaacgtctttcag
atgctcctagagatcctgacggtagaggaccctctgcagtctcagaggctcaaatatgca
tttgaatctgaaaagggccttctggctttgatgcatcagagcaacaatgtggacagcagt
cgctgctatcagtgtgtgaagttcctggtcacgctggcacagaaatgttctccagctaag
gactattttaaagagctctcaggacattggagttgggcagtgcagtggcttcagaagaag
atgtctgagcactactggacgcctcagagtaacgtatcgaacgagacgtccacagctaaa
accttccagcgcaccatctcagcacaggacactctagcttatgccacagctttactgaat
gagaaggagcagtccggcagcagtaatggttcagacggcagcccggccaatgagaactcg
gacagaagcctcagacaggggtccgaatccccaatgatgttgggtgattctcgaagtgat
ctagaagatgtggatccataa
DBGET
integrated database retrieval system
