Cyprinus carpio (common carp): 109113383
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Entry
109113383 CDS
T05134
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109113383 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109113383 (taf4b)
03036 Chromosome and associated proteins [BR:
ccar03036
]
109113383 (taf4b)
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109113383 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
109113383 (taf4b)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
109113383 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
109113383
NCBI-ProteinID:
XP_018981720
Ensembl:
ENSCCRG00000002963
UniProt:
A0A9Q9VKF3
LinkDB
All DBs
Position
B20:11470161..11489848
Genome browser
AA seq
849 aa
AA seq
DB search
MSETSGLDKLDNDQSRAPTENEENNNIAQKSNIDVSLEISQTTFEKKKEASDSNANTSEN
SKPDLASPNGEGEQPKPKTETDSSNTASQRPVTVLSSASSEAAPKVTAGPAQIRSTTPVV
IGARVVTTNVQGPGATSLALAPQPGRASVSSVAISQPRVTTLTTAKGAVVTLPRISTPSQ
SVPLTRTPQTVPLQLPANFQVPQGMVLIRSDSGQLMLVSQQALAQAQAQGMLPKPASASA
SAIVRPPSSQATVTTTPIIRVSFPPSSASATTNIKLNPTTGTAVQKPPTATGTAIFTPSC
TTGATIIKPAGVIGTAIRKPSSTVGPVIKASQMTPNSSTPGTFNQRTNSVTATTIINTSA
VKSVGKGALSTQGNAPRTVSPNVPARSSTNTSSTPVTVTAETLENVKKCKNFLVTLMKLA
SSGTRSANMAQNVKALVKALLDGKLEAEEFTEKLYMELKSSPQPYLVPFLKRSLPAVRQL
TPNSQLFIQQCDQLKPSDSAPTKAANQKSTASVSSSLKLNQPTRAAQLVIQQPKGVIVKQ
SLTSAQTGLPAQNQTQPKQILIQSNAHPAGAVVRQSILQASKTHFSQPLLPAQAHGFKDS
TSGSFRDDDDINDVASMAGVNLSEENARILASGSELVGSVIRSCQEEPFLFPSALQSRVL
EIGGSLSITEVCPDVLELLSLATQKRLRDLLEKITIVAQHRQISYKDDWRYSQTNDTRSQ
LKFLEQLERLEKQRREEEEREALLRIARSRTNSEDPEQQRLKQRAKEMQQLELAQMEHRD
ANLAALAALGPRKRKSLEAPGSGANQLLGSCGQFATRAPIRVTLRDLTFCMEQDPTFRHT
LMLYRAFLG
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaacatcgggtttggataaattagacaatgatcagtctcgcgcgccaacagaa
aacgaagaaaacaacaacatcgcgcaaaaaagcaacattgacgtgtctctggaaatttca
caaaccacatttgagaagaaaaaagaggcgtcagactctaatgctaacacctctgaaaac
agcaaaccagatttagcttctcctaatggggaaggagagcagccaaaaccaaagacagag
actgattcatcaaacactgctagtcagcggcctgtaacagttctgagctcagcctcatct
gaagctgctccaaaggtcacagcaggccctgcacagatcagatccaccacaccagtggtt
ataggggccagggtggtgacgactaatgttcagggaccaggggccaccagtttggcactg
gctcctcagcctggaagggcctctgttagctccgtggccataagccagcccagggtcacc
acactgaccacagccaaaggtgcagtcgtgacattgccaaggatttccaccccatcacaa
agtgtaccactgacacgcacccctcagactgtgccactgcagctgcctgccaacttccag
gtcccccaaggaatggtgttaatccgcagtgacagcgggcagttgatgttggtatctcag
caggctctggcccaggctcaggctcagggaatgctgccaaaaccagccagtgccagtgcc
tctgctatagttagacccccatcctcacaggcaactgtaaccactacaccaatcatcaga
gtttctttcccaccttccagtgcatcagctactaccaatattaaacttaaccccactaca
gggactgctgttcagaaaccacccaccgctacagggactgctattttcacaccatcatgt
acaacaggagctaccatcattaaaccagccggtgttatagggacagccatcaggaagccc
agctctaccgtggggcctgttatcaaagccagtcaaatgactccaaacagcagcacaccg
gggacctttaaccagaggactaattctgtcactgcaactaccataattaatacctctgct
gtaaagtctgtgggcaaaggtgctctctccacccagggtaatgccccacgtacagtgtct
cctaatgtaccagccagatccagcacaaacacatcatcaaccccagtcactgttacagct
gagaccttggagaatgtgaagaagtgtaaaaactttctggtcactcttatgaagctagca
tcgagcggcactcgctcggccaacatggctcagaacgtcaaagctcttgtcaaagccctg
ctggatgggaaactagaggcagaggagtttactgaaaaactctatatggagctcaaatca
tcccctcagccgtatctagtgcctttcctgaagaggagcctgccagctgtccgtcagctc
accccaaactcacagctcttcattcagcagtgcgaccaactcaagccctcagattcagca
ccaaccaaggctgcaaaccagaagtccactgcgtccgtcagctcctccctcaagctcaac
cagccaaccagagcggctcagttggtgatccagcaacctaaaggagtaatcgtcaaacag
tctttaacatcggctcagacgggtttacctgcacagaaccaaactcaacccaaacagata
ctcattcaaagcaatgctcacccagcaggtgctgttgtgcggcagtccatccttcaggca
tctaaaacacacttttcccagccactccttccagcgcaggcacacggcttcaaggacagc
acctcgggctctttccgagatgacgatgacattaatgatgtggcttccatggccggcgtg
aacctgagtgaggagaatgctcgtattttggcctctggctccgagcttgtgggatcagtg
atccgctcctgtcaagaggagccctttttattcccatcagcccttcagtcacgagtgctg
gagatcggtggatctttgagtatcacagaggtctgtcctgatgttcttgaactgctctct
ctggcgacacaaaagaggcttcgggacctgctggagaagataaccattgttgcacaacat
cgacagatttcttataaggatgattggcgctacagtcagaccaatgacacgcgctctcag
ctgaagttcctggagcaactggaaagactggagaagcagaggagggaggaagaggagcga
gaagccctgctccgcattgcccggagtcgcacaaacagtgaagacccagagcaacagcgt
ctgaaacagcgagccaaagagatgcagcagttggagttggcacagatggagcaccgagat
gcaaatttggcagcgctggcagccctggggccacgtaagaggaaatccttggaggctccc
ggctcaggggccaaccagttgttaggttcatgtgggcagtttgctactcgagcaccgatt
cgagtcactttgagagatctgaccttctgcatggagcaagaccccacattcagacacact
ctcatgctgtatagagcatttctaggctag
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