Cyprinus carpio (common carp): 109113475
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Entry
109113475 CDS
T05134
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109113475 (irx3a)
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
109113475 (irx3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
109113475
NCBI-ProteinID:
XP_042583802
Ensembl:
ENSCCRG00000003900
UniProt:
A0A8C1R686
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Position
B7:20870860..20874272
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AA seq
454 aa
AA seq
DB search
MSFPQLGYQYIRPIYPQDRQGIGSARAGTDLSPSGALSNVLSTMYGSPFAAAQSYGAFLP
YSNDLSIFNQLGAQYELKDSPGVQHPGFAHHHPAFYPYGQYQFGDPSRPKNATRESTSTL
KAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRSRTDEE
GNVYNSDHEGEDGDKREDEEEIDLENIDTENIENKDDLDEQDELHSDLKLDGRSDSEISD
GYEDLQGPEQRLFKAMVKDGKEIHGDRAEHFHHHSHHLHHHHNNLEQANSEPVKLNQAII
NSPPSENNPPPAPKPKIWSLAETATTPDNPRKSPLMNGTSAASAAQTIITPHRLLSCPVG
KIQSWANRGFTAHQLALLNSNHYLGLSNQASANGLALYSRQAEDRSQNSESTVTERSSAL
EAEKKLLKTAFHPVQRRPQNQLEAAMVLSALSSS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccacagttgggatatcagtacatccgacccatatacccgcaggacaggcag
gggataggcagtgcccgagccgggacagacctgagcccatccggagcgctctctaatgtt
ctctccactatgtacggatcacctttcgctgccgcacaaagctatggagcttttcttcct
tattcaaatgatctgtccattttcaaccagctgggggcacaatacgaactgaaggacagt
ccgggcgtccagcatcctggatttgcccaccatcatcctgctttttacccatatggtcag
taccagttcggagacccttccagacccaaaaatgccaccagggagagcaccagcacgctc
aaggcctggttaagtgagcaccggaaaaacccgtaccctaccaaaggcgagaagattatg
ctggccattatcactaaaatgaccctcactcaagtgtccacctggttcgccaatgccagg
aggaggctaaagaaggagaacaagatgacctgggccccacggagtcgcacagacgaagaa
ggaaatgtttacaacagcgatcacgagggagaggacggcgacaaacgcgaggatgaggag
gaaatcgatttggaaaatattgacacggagaatattgaaaataaggacgatttagacgag
caggacgagctgcattctgacttgaaactggacggcaggagcgactctgaaatttcagac
ggctatgaggatttacaaggaccggagcaaaggttgttcaaagcgatggtgaaagacggc
aaagagattcacggcgaccgcgcagagcactttcaccatcacagtcatcatcttcatcac
caccacaacaacttagaacaggccaacagcgagccggtcaaactcaaccaggccatcatc
aactctccgccctcagaaaacaacccacctccggctccaaaacctaagatctggtctttg
gcagagactgccacaactccagacaatccacgaaaatctcctctgatgaacgggacttcc
gctgcgtccgccgctcagaccatcatcactcctcacagactcctttcgtgtcccgtaggg
aaaatccagagctgggcaaatcggggtttcaccgcacaccagctcgccttgctgaactca
aaccactacttaggactcagtaaccaggcttcggcgaatggccttgccctgtacagcaga
caagcagaggacaggagtcaaaactccgagtccacagtcacagaaagatctagtgccttg
gaagcagagaaaaagttgttaaaaacagccttccatcctgttcagagacggccccagaac
caactcgaagctgccatggtattatccgccctctcgtcctcgtag
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