Cyprinus carpio (common carp): 109113476
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Entry
109113476 CDS
T05134
Name
(RefSeq) iroquois-class homeodomain protein irx-5-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109113476
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
109113476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
MRP-S32
Motif
Other DBs
NCBI-GeneID:
109113476
NCBI-ProteinID:
XP_042583801
Ensembl:
ENSCCRG00000003884
UniProt:
A0A8C1NE01
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All DBs
Position
B7:complement(20678613..20686331)
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AA seq
445 aa
AA seq
DB search
MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLPYSADAAAATFTSYVSSPYDHTTGMAGSIGYHPYAAPLGSYPYGDPAYRKNTTRD
ATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRN
RSEDEEEDENIDLEKNDDDEPNKPTDKGDSTDTEADNKLINPGELPCDRFKDESHAKDLD
PPLTDSELKDAEERTDLLAEQAKPTTSSPSVLQRGNDLITQEKPPEPGHAASTVNSNVTS
VIHSPPSAPKPKLWSLAEIATSSDRCKGSSEAPQAAGLGQSTVIASAASPTRSSPQCPLP
NNTVLSRPIYYTSPFYPGYTNYSTFGHLHSSHGTNSSSTAHFNGLSQTVLNRAEALVRES
KVRSQTQVDLCKDSPYELKKGMSNI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccctcagggctacttgtatcagccatccgcctctttggcactctattcgtgt
cctgcctacagtaccagcgtgatatcgggacctcggacagaggagctagggagatcttcc
tctggctctgctttcgctccctatgccggatctacagcgttcaccagcgcctcgccaggc
tacaattcccatctcccgtacagcgctgacgcggccgccgccactttcacttcttatgtg
agctccccgtatgaccacaccacaggcatggccggatctatagggtatcatccttacgct
gctcccttgggctcgtacccgtatggagacccagcttaccgcaagaatactacccgggac
gccacagccactttgaaagcttggcttaacgagcaccggaaaaacccgtaccccaccaaa
ggcgagaagatcatgctggccatcatcacgaaaatgaccctcactcaagtgtccacctgg
ttcgctaacgccaggaggaggctaaagaaggagaacaagatgacctggaccccacggaac
cggagcgaggacgaggaggaggacgaaaacattgatctcgagaaaaacgacgacgacgag
ccaaacaagcccacggacaagggagactccacagacacagaggcagataataaactcatc
aacccaggggagctaccatgcgacaggtttaaagacgagtctcatgctaaagatcttgat
ccacctttgacagactcggaattaaaagacgcagaggagaggacggatttgctcgccgag
caagcaaaacccaccacttcttctccctccgtcctacagagagggaatgatctcattacg
caagaaaagcccccagaaccgggccacgccgccagcacggtgaacagcaacgtaacgtct
gttattcattctcccccttcggcgcccaaacccaaactctggtctctagccgagatcgcc
acgtcctcggacaggtgcaaagggagcagtgaggctccacaggccgcggggctgggtcaa
agcacagtcatagccagcgctgcctcgccgacccggtcctccccccagtgtcctctccct
aataacactgtcctttctcggcctatttactacacgtcccctttttacccgggctacacg
aactatagcactttcggacacctccacagcagccacggcaccaacagcagctccacggca
catttcaatggattaagccagactgttttaaacagagccgaggctctggtaagagagagc
aaagtaagaagccaaacacaggtagatctttgtaaagactcaccttatgagctaaagaaa
ggtatgtcaaacatttaa
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