Cyprinus carpio (common carp): 109113556
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Entry
109113556 CDS
T05134
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
109113556 (taf1b)
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
109113556 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
N36
Motif
Other DBs
NCBI-GeneID:
109113556
NCBI-ProteinID:
XP_042602143
Ensembl:
ENSCCRG00000031078
UniProt:
A0A9Q9XHW7
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All DBs
Position
B20:complement(17175474..17180034)
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AA seq
600 aa
AA seq
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MDEQLTDGYSEPCGQCAAVDWGVSDEGQFFCRSCHNVIEKTREVVDVNTLHSKHSRISQI
TRPKKKRQENEREWMICEGFQFILKHQAKALVSLGVCMKFETEVLWNFWKRYLQNTQQAF
TRNPVYTPRFTVFMKSQSDLESNSQSEQSNHTEVASEMSEEMSVSGYSSEAQSSVCSGSL
DAAVYQNIKGTKMHNLMTMPRTLALCYLALLWVREAVTLADLLRMVSERRVPYMNIHEAF
PAEMRLFGKDVQFFNVRYLPSYSLVHKEAVTLARILQLPSFPTVSQDCLLHPLPLTLRYL
LEANLPNELHVWVHKVMRQAAMVDSNFLTFDPSKEKPHLLRYDIQAVAIIIVALKLLFKL
DDHVEWKLSEEAAKKKKKKVFKLKRWFDVVQPVLEQARKREEREEAQRQWGTTKPFITSL
KRKSLVLKKRRVAEHLEQKFQKFTDSAPEESSSLTNHHSSFHFSWGKEDGSDGPSMYKKR
LECTFKKDGFKYLCNRKYWHPELRLCPRKTCGDHFSEIEPSLPRMYVWVLDLFSFILGVR
QAEVHKEVLGVERRFLKRNHQPKIQWTLTSCEKKKKRCKTATHVVRKKTRVHEENITDGE
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacaacttactgatggatacagtgagccatgcggccagtgcgctgctgtggac
tggggagtgtcagacgagggacagttcttctgcaggagctgccacaatgtgatcgagaaa
acgagggaggtggtggatgtgaacacccttcatagtaaacacagcaggatctcacaaata
acaagacccaaaaagaaaagacaagagaatgagcgagagtggatgatatgtgagggattt
cagttcatcttgaaacaccaggccaaggctttggtcagtctcggtgtctgtatgaagttt
gagacagaagttttgtggaatttctggaagagatacctgcagaacacacagcaagctttc
accagaaatccagtgtacactccaagatttacggtgttcatgaagtcacagagtgatttg
gagtctaactctcaaagtgagcagtctaatcatactgaagttgcttcagagatgtcagaa
gagatgtctgtctcaggttactccagtgaggcacagtcatcagtatgttcagggtcttta
gatgctgctgtgtaccaaaatataaaggggacaaaaatgcacaatcttatgactatgcca
cggacactggccctgtgctatctggctctgctgtgggtccgagaggccgtcactctggct
gacttactgaggatggtctcagagaggcgtgttccttacatgaacattcatgaggcattt
ccagcggagatgagactgttcggaaaagatgtccagttctttaatgttcggtaccttccg
tcctactcgctggttcataaagaagctgtgactctggctcggatcttgcagttaccctcc
tttccaacagtttctcaggattgccttctccacccgttaccactcactcttcgctatctg
ttggaggcaaacctcccaaatgagcttcatgtttgggtccacaaggttatgagacaggct
gctatggtggacagcaattttctgacctttgaccccagcaaggagaagcctcatctcttg
cgctatgacattcaagcagtagctatcatcattgtcgccttgaagctccttttcaagttg
gatgatcatgttgagtggaagttatctgaggaagcagccaagaagaagaaaaagaaagtt
ttcaagttaaaaaggtggtttgatgttgtacaacctgtcttggagcaagccagaaagagg
gaagaacgagaggaagctcaacggcaatggggaaccactaagcctttcattacatctttg
aaacgcaagagcttggttctcaaaaaaagacgtgtcgctgaacatttggagcagaaattt
cagaagtttacagactctgcaccagaagagtcgtcttccttaacaaaccatcattccagc
tttcacttcagctggggaaaggaggacggttctgatggacccagtatgtataagaaacgt
ttggaatgtacctttaagaaagatgggttcaagtacctctgcaaccgaaaatactggcat
cctgaactgagattatgcccacgcaagacatgtggggatcatttctcagaaattgagccc
agtttgcccaggatgtacgtgtgggtccttgatctcttctctttcattcttggagtccgt
caggcagaagtgcacaaagaggtcctcggcgttgaacgtcgttttttgaaaaggaatcat
cagcccaagattcaatggactttaacttcctgcgaaaagaagaaaaaaaggtgcaaaacc
gcaacccatgttgttagaaagaaaacccgtgttcatgaagagaatatcactgatggagaa
tga
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