KEGG   Cyprinus carpio (common carp): 109113762
Entry
109113762         CDS       T05134                                 
Symbol
atxn2l
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
ccar  Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccar03019]
    109113762 (atxn2l)
Messenger RNA biogenesis [BR:ccar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109113762 (atxn2l)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 DUF6066
Other DBs
NCBI-GeneID: 109113762
NCBI-ProteinID: XP_042583071
UniProt: A0A8C1RAA3
LinkDB
Position
A3:complement(26975899..26988458)
AA seq 1041 aa
MSFRRQNQPGPGGRKTSNGTTGSMASSVPGSNSNRATPGRNRNSVKAPSQSPPVFEGVYN
NSRMLHFLTAVVGSRCDVMVKNGSLYEGIFKTLSSRCELAVDAVHKVKNEEGDGGGGTPV
HPRREEITDTMIFGPNDLVTMICRDVDLNYATRDTFTDSAIGSRVNGDHREKVLQRWDGG
DSNGENFDLDADTSNGWDASEMFRFNEETYGVKSTYDASLSMYTVPLERGSSEGFRQREA
RAARLASEIEASTQYRNRVALENDEGRTEEDKYSAVTRDRDRDGGERGRDSPGFSSAGSR
EGKYIPLPQRAREREIGVSGRGERGGAVSNLPNRTNRPGPSSSSPRPLPSGSGQPIPPTD
RSSPLSVRGGYSTHQSQSSPPTQPRPSEPGHSSPPSPHTLPHSLSHPQSLSDSARPVNGV
SSRMSPKSQRPGQTNRNLRTSNSHSSPTVSRSPKPDVPSQDPPLANPSYLDTSSVTMGTP
KPTGPTPLFPVDVNEILSKERMESPASPQEGKSSKVPSVQQRSQLEELRKFSNNFILPSN
ANLSSPKTANTDSAQANPAHNTQTDPAPLTEAKTAPPTTPNAELPAEERSRETNAEGAAT
TTPPPATSISAPSAMSGTAMKNPTAEGQTSGTPQPARTPGSEEGKPEASERSEGMADQVK
KSTLNPNAKEFNPTKAPLTMVKPSATPTPPRPTPQSPTVVLQPPPGQGAIYNTPYLSYGL
PIQIQGHSAPQMYQYSMTTVGQGKYPRTKGSVVTPRPDHSSSAPPMMQAAASAAGPPLVA
SPYPPSYLQYNQVIQAMPHYPGQMYSMLQGGPRMLGSGGHPQTLGPPGPQYPGQNEGPPA
PQQGMYAPQSFSHHSGSIHHPQPSSTPTGSQPPPQHPAPSPGQVHLPASQPVHPKLAYQL
HIYSSGQSGPQPQSLYHSGPLSAPTPPNMPPGHSSPQASYSLQGYSLPGHQPLPHPYSSL
GQLTQTHVQGALSGPHHSGGHGPPPVMLLHAPQHPPQQGSGPQHGPPPQQGPHQHFTYIG
PPQMPVQTHPSQQIQFHPSGN
NT seq 3126 nt   +upstreamnt  +downstreamnt
atgtcttttcgccgacagaaccaacctggacccggtggccgcaaaacatccaatggaact
acagggtcgatggcttcatccgttccggggagcaactctaacagagccaccccgggcaga
aacagaaactctgtgaaggctccctcacagtcaccaccagtgtttgagggtgtgtacaac
aactcccggatgctccattttctcacagccgtggtgggctccagatgtgatgttatggtg
aagaacggcagtttatatgagggaatcttcaagacgttaagctcgcgttgtgagctggca
gtggacgcagtgcacaaagtgaaaaatgaagaaggagatggtggcggaggcacaccagtc
caccccaggagagaagagatcacggacaccatgatctttggccctaatgacctggtcact
atgatctgcagagatgtggacctcaactacgctacccgagacactttcacagactccgca
atcggctcaagagtaaatggtgaccacagagagaaggtgcttcaaaggtgggatggaggc
gatagcaatggagaaaattttgacctagatgcagatacatctaatggctgggatgccagc
gagatgttccgcttcaatgaggagacctatggggtgaagtccacctatgatgccagtctc
tccatgtacacggttcctctggagcggggcagctctgagggcttcagacagcgagaggct
cgagccgcccgattggccagtgagattgaggctagtacgcagtatcgtaacagggtggcg
ctggagaatgatgagggacgaactgaggaagacaaatacagtgctgtgactcgggacaga
gaccgtgatggaggagaaagaggaagagatagtcctgggttctccagtgctgggagcagg
gagggcaagtacattcctctaccccagagggcaagggagagagaaataggagtttctgga
aggggcgaaaggggaggagctgtatccaacctgcctaatcgaacaaatagacctggcccc
tcaagctcctcgcctagacctctcccctctggtagtggtcagcccattcctcccactgat
aggagcagtccactgtccgtcagaggaggatactctacacaccaatcacagagcagcccc
cctacgcagccccgcccctcagagccgggtcactccagccctccttccccacacacactc
ccacattcgctctcacacccgcagtctctctcagactcggcccggcctgtcaacggagtg
tcatccagaatgtcacctaagtctcaaaggcctggacagaccaacagaaacctgcgtacc
tcaaactctcactcctcccctacagtctctcgttcccctaaaccagatgttccttcccag
gaccctcctctggctaatccttcctacctggatacctcttcagttactatggggaccccc
aaacccactggccccacccctctgttccctgtagatgtgaatgaaatcctgtcgaaggaa
aggatggagagtccagctagtcctcaggagggcaagagcagcaaagtcccttcagtccaa
cagagatcacaactcgaggagcttcgcaagttttctaataattttattcttccatctaac
gccaacctttccagccccaaaactgcgaacacagactctgctcaagcaaaccccgcccac
aacacacaaacagaccccgcccctctaacggaagctaaaacagccccgcccacaactccg
aatgcagagcttccagcagaggagagaagtagagagacaaatgcagagggggcggcaacc
accacccctccaccagccacatccatctctgcaccctctgccatgtctggcactgccatg
aaaaatccaactgcagaagggcaaacatcaggcacaccccaacctgcaaggaccccaggc
agtgaggagggcaaaccggaggcctctgagagatcagagggcatggctgatcaagtgaag
aaatccacactcaaccccaacgccaaagagttcaaccccaccaaggctcctctaaccatg
gtgaagccctcggccactccgaccccgccacgaccaactccacagagccccacggtggtg
ctgcagcccccgccaggccagggagccatttacaacactccgtacctgagctatggcctg
cccatccagatacagggccactcggcacctcaaatgtaccagtattccatgacaaccgtt
ggtcaagggaagtacccaagaacaaaaggttctgtggtgactcctcgtccagaccacagc
tcttcagcgccccctatgatgcaggctgcagcttcagcagcaggacctcctctggtggcg
tctccttaccctccctcatatctgcagtacaaccaggtcatacaggcaatgccccactac
cctggacagatgtactctatgctccagggtggaccacgaatgcttggatcaggagggcac
ccacagaccctgggacccccaggcccccagtaccctggtcaaaatgaaggaccaccagcc
cctcagcaggggatgtatgctccacagtcattctctcatcactctggttccattcatcat
cctcagccctccagcacccccacaggcagccagccgccccctcaacaccccgcccccagt
ccaggacaggtacatctgcctgccagtcaaccagtccacccaaaactggcatatcagcta
cacatctattcctctggtcagtctggtcctcagcctcagtctttgtatcactctgggccg
ctgtcagcccccacgccccctaacatgcccccaggacacagctccccacaggcctcctac
tcccttcagggctacagcctgccgggacaccagcccctgcctcacccctactcctctcta
ggacagctgacacagacccatgttcaaggtgctctctcgggtcctcaccactcaggaggt
cacggcccaccgcctgtgatgttgcttcatgccccacaacatccccctcagcagggttct
ggtccccagcacggacctccaccccagcagggaccccaccagcacttcacctacattgga
ccacctcagatgccagtgcagactcatccttcccagcagattcaattccacccttctgga
aactga

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