Cyprinus carpio (common carp): 122133956
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Entry
122133956 CDS
T05134
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122133956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
122133956
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122133956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
122133956
NCBI-ProteinID:
XP_042567681
UniProt:
A0A9Q9ZNU0
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Position
A22:complement(6496364..6500540)
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AA seq
298 aa
AA seq
DB search
MLATGTTVTTAGLTQVDRDKIYQWINELSSPETRENALLELSKKRESVTDLAPMLWHSCG
TIASFLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHVETRSAFLAAHIPLFLYP
FLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTV
ATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSD
NSRAREALRQCLPDQLKDTTFAQVLKDDSTTKRWLAQLVKNLQEGQVTDPRGIPLPPQ
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgctggctacaggaacgactgtaaccacggcgggtctgacgcaggtggaccgtgacaag
atctatcaatggatcaacgagctctccagccctgaaacgcgtgagaacgccctgctggag
ctcagcaagaagagggagtctgtgacagatctggccccgatgctctggcactcctgtggt
actatagccagttttttacaggagattgtgaacatctacccatccataaaccccccgaca
ctgacagcacatcagtctaatcgagtgtgtaacgctttagcactgctgcagtgtgtggcc
tcccacgtagagacacgctctgctttcctggcagctcacatccctctgtttctgtatccc
ttcctgcacacggtcagtaaaactcgaccctttgaatacctgcggctcacaagtctgggt
gttatcggtgcactagtgaaaacagatgagcaggaggtgatcaacttcctgttgaccaca
gaaatcattcctctctgtctgcgcatcatggagtccggcagcgagctctccaaaacggtg
gccacatttatactgcagaagatcctcctggatgacacgggtcttgcgtatatctgccag
acctacgaacgcttttcacatgtcgccatgatactgggaaagatggttcttcagttgtct
aaggagccttcggctcgcctgctgaaacatgttgtgcgctgttatttacggctttctgac
aactccagggcgagagaagctctgcgtcagtgcctgcccgaccagctgaaggacaccacg
tttgctcaagtgctaaaggacgactccaccaccaaacgctggcttgctcagcttgtcaaa
aacctacaggaagggcaggtcacagacccccgcggcatccccttacctcctcagtaa
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