Cyprinus carpio (common carp): 122134038
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Entry
122134038 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 2-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122134038
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122134038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
122134038
Spliceosome [BR:
ccar03041
]
Common components
Common spliceosomal components
SR proteins
122134038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_occluded
Nup35_RRM_2
RRM_8
Motif
Other DBs
NCBI-GeneID:
122134038
NCBI-ProteinID:
XP_042623847
UniProt:
A0A9Q9YP76
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All DBs
Position
A12:complement(17167230..17171042)
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AA seq
220 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHYSRRGGPPRRYGGHGRRSRSR
SPRRRRHSRSRSRSRXRSRSRSRYSRSRSYSRSRSRSRSRSKTRTPRRSKSKSASRSRSR
SKSKSRSRSHTPRSNKGSKSRSRSRSRPKSPEDTGATAES
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggcagacctccgcccgacgtcgagggcatgacatctttaaaagtcgacaat
ctgacgtaccgcacgtcccctgaaacgctgcggcgggttttcgagaagtacggccgagtc
ggggacgtctatatcccgagagaccggtacacaaaagagagccgcgggttcgcctttgtc
cgttttcatgataagcgggacgcggaggatgcaatggacgccatggacggcgcgctgctg
gacggccgcgaactgcgcgtgcaaatggcgcgatacgggcgcccgccagattcacattac
agccgccgcggaggcccgccgaggagatacgggggacatggacggagaagccgaagccgt
agtcctcggcgcaggaggcacagcaggtctcgatccaggagcagannacgttcccgcagc
aggtcccgctacagccgatccaggtcctactcccgttcccgatctaggtcccgttcccgc
tccaaaacccgcacaccacgcagaagcaagtccaaatcggcttccaggtcccgttcaagg
tctaagtccaagtctcgctccaggagccatactcccagatcaaacaaaggatccaaatca
cggtccagatcgagaagcagacccaaatctccagaggatactggagccactgctgaatcc
tga
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