Cyprinus carpio (common carp): 122135111
Help
Entry
122135111 CDS
T05134
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03013
Nucleocytoplasmic transport
ccar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122135111
03015 mRNA surveillance pathway
122135111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
122135111
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122135111
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122135111
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
122135111
NCBI-ProteinID:
XP_042569486
LinkDB
All DBs
Position
A23
Genome browser
AA seq
474 aa
AA seq
DB search
MSTDSWALSVDEQESTAKSIGKLRIKAAGDANIPKTDGDGDKSDEEEKEDRATQSLLNKL
IRSNVVNNTNQVEVLQRDPNSPLYSVKTFEELRLKPQLLKGVYEMGFNRPSKIQENALPM
MLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPSLKWPQCLCISPTYELALQTGKVIEQM
GKFYSEVKLAYAVRGHKMDRGVKIKEQIVIGTPGTVLDWCVKLKLIDPKKIKVFVLDEAD
VMIATQGHQDQSIRIQRMLPKGCQMLLFSATFEDSVWKFAERVVPDPNIIKLKREEETLD
TIKQYYVLCNSKEDKFNALCNIYGAITIAQAMIFCHTRKTANWLAGQLSKEGHQVALLSG
EMVVEQRAAVIERFRDGKEKVLITTNVCARGIDVEQVSVVINFDLPLDKDGNPDNETYLH
RIGRTGRFGKRGLAVNMVDSQRSMEILKTYEKHFNKKIGRLDTDDLDEIEKIAN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgactcgtgggctctatctgtggacgaacaagagtctacagccaagtctatt
gggaaattgcggattaaggcagctggagatgcaaatatacccaagactgatggtgatggt
gacaaatctgatgaagaagaaaaagaggacagagccactcagtctctcctaaacaagctg
atcagaagcaatgtggtcaacaacacgaaccaagtggaggttcttcagagggacccaaac
tcaccactttattcagtcaagaccttcgaggagctgagactgaaacctcagttgctcaaa
ggcgtctatgaaatgggcttcaacagaccttctaaaatccaagagaatgcccttcccatg
atgctcgccgaaccacctcagaatctgatcgctcagtctcagtctggcactggtaaaaca
gcagccttcgtgctggccatgctcagtcatgtggacccaagcttaaaatggcctcagtgt
ttgtgcatttctcccacatatgagctcgctctgcagacgggtaaagtcatcgagcagatg
ggcaagttctattcagaagtcaaactggcatatgctgttcgaggacataaaatggatcgt
ggcgttaagatcaaggagcagatcgtcatcggcacacctgggacggttctggactggtgt
gttaagctgaagctcattgacccgaaaaagatcaaagtgtttgttctggacgaggctgat
gtgatgatcgccacacagggacaccaggaccagagcatccgcattcagagaatgctgccc
aaaggctgtcagatgttacttttctctgccacctttgaggactctgtgtggaagtttgct
gagcgggtcgtgccagatcccaacatcatcaagcttaaacgtgaagaggagaccctggac
actatcaagcagtactacgtgctctgtaacagcaaagaggacaagttcaatgcactctgt
aacatctacggagccattactatcgcacaagctatgatcttctgtcatactcggaaaaca
gccaattggctcgccggccagctgtctaaagagggccaccaggtggcgctcctcagtggg
gaaatggtagtcgagcagagagctgcagttattgagcgttttagagacggcaaggagaaa
gttctcatcactactaatgtctgtgccagaggtattgatgttgaacaagtgtcagtggtg
atcaactttgaccttccactggacaaagacggcaatccagacaatgaaacatacctccac
cggatcggcagaactggtcgttttggcaagagaggactcgctgtcaacatggtggacagt
cagcgcagcatggagattctcaagacatatgaaaagcattttaataagaaaattgggagg
ctggatacagatgatctcgatgaaatcgaaaaaatcgccaactga
DBGET
integrated database retrieval system
