Cyprinus carpio (common carp): 122140472
Help
Entry
122140472 CDS
T05134
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122140472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccar03021
]
122140472
03036 Chromosome and associated proteins [BR:
ccar03036
]
122140472
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122140472
Coactivators
SAGA/TFTC/STAGA complex
122140472
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
122140472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
122140472
NCBI-ProteinID:
XP_042600461
UniProt:
A0A9Q9XG13
LinkDB
All DBs
Position
B18:complement(24528504..24615961)
Genome browser
AA seq
888 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLVGQSEPPAARPSSAKQQQQQQTGGTAQL
PAPGDSPSEPQQQAQQQQNARKAPRNPDSDPKDASMDKHAKALEKESPLKSHGSIIIITT
AAAAAASEAPAPGNKGESPRDTRKKHPGNTRALRSAASHSLNGNGSDAASASAASPSTSS
TTVTVSSNPQAIALDRGTPTIALHRLPRHIIASIAQNGNGTSVSALVQQGARINHSKTPA
DNNAKPAATSATAASVKATVSAAAVIRPAQTQTQTQTQTPAQQRVVTPQLIVRPPQQQTT
IQLPPGFTIPPGMVLVRTEMGQLVMVPQQALAQAQAQNSVSPRPSTPTSVATFRVTTPQS
PVSAQAIRPAPAAQTKPVQSNSPSAAAQTSTAAGPAKGPVAAAVAVTAPQQVQPALGPQG
PLTQMPLAPQSAATPAPGAPLVSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKSL
VQDLLDAKIDPEEFTSRLQSELKSSPQPYLVPFLKKSLPALRLSLLSSQQSLTVPLQPNK
TSVTPVQTGVCVRPHQPNSTTVLPQGIKRAVGPGGQIRMPVVITQTVRATGALGKPAVIQ
TGKSPVGVTIQLSGNQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARILATNSDLV
GTQIRSCKDEAFLPAGLLHRRILETAKRFGVTDVPLEAVNFISHATQSRLRTVLEKVSSI
AQHRMDSCKEEEWFEQSSDVRSQLKFFEQLERMEKQRKDEREREILLRAAKSRSRQEDPE
QARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGATTTGTEVSGSSAGSP
GGSSAQSSSSRQYNRQRITRVNLRDFIFYMEQERQTSRSLLLYRALLK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccctctggaagacatgctcttctccgaggtggacgagaaagcc
gtgagcgatctggtgggctcgctggagtctcagctggtgggccagagcgagccgcccgcc
gcgcgcccgagcagcgcgaagcagcagcagcagcagcagacaggaggaacagcgcagctg
cctgctcctggagactctccatcagaaccacaacaacaagcgcagcagcagcagaacgcg
cggaaagcgccgcgcaacccggattctgacccgaaagacgccagcatggacaagcacgcc
aaagctctggagaaggagagccctctgaagtcgcatggcagcatcatcatcatcactaca
gcagcggcagcagcagcatccgaggctcctgcaccgggcaacaaaggtgagagcccgagg
gacacccgcaagaagcacccggggaatacgcgcgcgctgcgctccgcagcatcccacagt
ctcaacggcaacggaagcgacgcagcatcagcatcagcagcatcacccagcacctccagc
acgactgtcaccgtgtccagtaacccgcaggcgatcgcgctggaccgcgggacgcccacc
atcgcgctgcaccgactcccgcgtcacatcatcgccagcatcgcgcagaatggaaacggc
acgtcggtgtccgcgttggtccagcagggcgcgcggatcaaccacagcaaaacacccgcg
gacaacaacgcgaagccagcggccacctcggccacagcagcgtctgtcaaagccactgtc
agcgcggctgcggtcatcagacccgcgcagacgcagacgcagacgcagacgcagactcct
gcgcagcagagggtcgtaacgccgcagctgattgtcagaccaccgcaacagcaaactact
atacagctgccgcccggattcaccatccctccaggtatggtgctggtccggacggagatg
ggtcagctggtgatggttcctcagcaggctctggctcaagctcaggcccagaacagcgtc
tcaccgcggccctccacacccaccagtgtggccacgttcagggtcacgaccccacagtct
cctgttagtgctcaggcgattcgtcccgctcctgcggctcaaactaaaccggtccagtcg
aattcaccgagcgccgcggcccagaccagcaccgcagccggccccgctaagggccccgtg
gcagccgccgtggcagtgacagctccccagcaggtccagccagctttgggcccccagggg
cccctcactcagatgccactggccccgcagagcgcagccaccccggcccccggagctccg
cttgtctcccaggagatgcaggagaacgtgaagaagtgcaagaacttcttggcgactttg
atcaagttggcgtcccataattccccttccccggagacgtctcgaaacgtgaaatcgctg
gtgcaggatttactggacgcgaagatcgatccggaggagttcaccagccgcttacagtcc
gagctgaagtcgtctccgcagccgtacctcgtccctttcctgaagaaaagtctccctgcg
ttgcgtctgtctctcctgagcagccagcagtctctcacagtccctttgcagcccaacaaa
accagcgtgacgccggtccagacgggtgtctgtgtgcgtccgcaccagcccaacagcacc
accgtactgccacaaggtataaagagggcagtgggtcctggaggtcagatacggatgcct
gtggtcataacgcagacggtgcgagcgacaggtgctttagggaagcctgcggtgatccag
acgggcaaaagccctgtgggcgtcaccatacagctctcaggaaaccagaaaaacaagctg
aatgacccggggggaggctccttcagagacgatgatgacatcaacgatgttgcgtctatg
gctggtgtgaacctcaacgaggagagcgcgcgcattctagcgaccaactctgatctggtg
ggaacgcagatccgctcctgtaaagacgaggccttcctgcctgcaggtctgttacaccgg
cgtatactggaaacagcgaagaggtttggagtgacggacgtaccgctggaggctgtgaac
tttatctctcacgccacacagtccagattacgcacggtgctggagaaagtttcctccatt
gcccagcaccgaatggactcgtgtaaggaagaagagtggttcgagcagtcgtctgatgtg
cgctcgcagctcaagtttttcgagcagttggaacggatggaaaagcagaggaaagatgag
cgagaacgagagattctcctcagagcggcgaagagtcgctcgcggcaagaagatccagaa
caagcccgtctgaagcagaaagcaaaggagatgcagcagcaggaactcgctcaaatgaga
caacgagacgccaacctgacggcactcgctgccattggccctcggaaaaaacgcaaagtg
gactcgccaggagcaacgacgacaggcactgaggtgtcggggagttcggcaggttctccg
ggcggatcgtcggcccagtccagctcatcgcggcagtataaccgccagagaataacacgc
gtcaacctcagggacttcatcttctacatggagcaggagagacagaccagcagatctctc
ttactgtaccgcgctctcctgaagtag
DBGET
integrated database retrieval system
