Cyprinus carpio (common carp): 122144691
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Entry
122144691 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122144691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
122144691
03021 Transcription machinery [BR:
ccar03021
]
122144691
03036 Chromosome and associated proteins [BR:
ccar03036
]
122144691
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
ARID
122144691
Transcription machinery [BR:
ccar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122144691
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122144691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Rv0078B
Motif
Other DBs
NCBI-GeneID:
122144691
NCBI-ProteinID:
XP_042611759
UniProt:
A0A9Q9Y168
LinkDB
All DBs
Position
Unknown
AA seq
1631 aa
AA seq
DB search
MRSGPSPSPVGSPVGSSQSRSGPISPASGPGTQMAPQTPGNVPDVGSHSTHSQSPMSQER
GFAPNMQRNVPGPQFAGQQPGPSMSPHSCPTGPMHHSMGSYQLGPSYGPQVGQYGPSGNY
PRPPNYGGAPGANYSGPGPGMGNSLGMNASSPMHGQGPGQPCGSLTTARGPGHAAGGRPY
PAGSSSVAPTSPNMPQSAGPGMGPPPPNVSRKPHESGPASAQQNPVPSGQPRHLFGRSPV
YPGLSGPGGRPASFPIPHPHHPHYSSGQGQGHPHTELYGPVGYQGGSHMLGMGPGGPYNH
PPSNSAARMTPQGPSYNTVPTGPMAGSGDSMMPTDPKLRAEHKEEGSTPTTEPPKPKDNY
GSQCVSQPPTPSPLSPSPASLSSYQGDDSDSISSPAWPKNPSSPKHSSGNMTNEKITRLY
DLGCEPERRAWVDRYIAFMEERGTPVLNLPSVGKKPLDLCRLYLCVREIGGLAMVNKNKK
WRELSTHLNVGTSSSSASSLKKQYIQYLFAYECKVERGEEPPPDVFTVAESKKQPQQAKI
QPPSPANSGSLQGPQTPQSTGSSTMTEMPGDLKPPTPATTPHGQVTPQPSGRNSGVSVQD
PFSESSDPAFQKRGPMHGGGSGDASSRMQFDTSKDPYGAARKGGSEPFMPGQMPGSGMQE
MYPRGPPSGMGMGPRPQYSYNTGFERRPEHVMGPEGGIGPSGNQNNMVLSNSDPSMFSGS
RYASHQRHGHDGYGQQYPHSMPYGAHGMYAQQQGYKRPGEGMYGPPAKRHESEAYGMQYG
GQQPDMYSQYGYPERRPMQGPFPYQYGRDRMQPGGQGPPQHSMMSGGPPPSSNSSGGPQG
NMWHTRHDMSYPYPGRQGHGAPYPSMSRGDDPEVRASQDSQWPGQRQSPYPPHSSSSASS
MPPMASRQPPSSYQSPPAMPNHISRVPSPAPFPRSVGGSMSPNKAHMMASMKQMQKPGGP
SSQSGGLPGQGFPAIHREVTYPLDSVEGTQPQLKPHRRLTSKEIGTPEAWRVMMSLKSGL
LAESTWALDTINILLYDDNTVSSFGLSQLPGFLELVVEYFRRCLIEIFGILEEYEIGTVG
QKTLLGPCSEPTEKEQPSNQDLKSQSNKDQVERLDVEPEKPQPSSSAAELNMEKREDSAE
GKADEKNTGKEPCPPVEPRPKQASKYDKLPVKVEEREAVADCVEDRSELLGLAGEFTSGL
LHWKAGGGDSTAHIQTHLERRREEEQKPSENQEGVQALSKETVEEEHGREKELKRELPGP
SEENLTATVDDMLSSRPGSLSEGETQTFPFRNREKQSTITLLEDEPRCWDEAPLSIAEGW
QDELAKRCMCVSNIIRGLSFVPGNDSELARHPGLVLILGKLVLLHHEHPKRKRMPPTYQR
EEERGLACSKDEWWWDCLGALRENTLVTLANISGQLDLSIYPESICLPILDGLLHWMVCP
SAEAQDPFCTANGFSSLTPQRLVLECLCKLSIQDSNVDLLLATPPFSRQERLFATLVRHV
GERKSQVCREMAVAILSNLAQGDPTAARSVALQKGSVGALINFLEDSVAMAQYQQSPHSL
LHMAHPTQPEPPSINMMCRAAKALLAMAQVEENRPEFVLYESRLLDISLSSVLNSGVAAI
LCEVLFKLGRS
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcgggccctcgccctcgccggttggatcacctgtgggttccagccaatcacgt
tctgggcccatatcacctgccagtgggccaggtacacagatggcccctcagaccccaggg
aatgtcccagacgtgggctcccattccactcacagtcagtcgcccatgtctcaggagaga
ggatttgcacctaacatgcagcgcaatgtacctggtccccagtttgcagggcagcagccg
ggaccttctatgtctccacactcctgtcccactggccctatgcaccatagtatgggctcc
tatcagctgggcccctcttatggaccccaggtgggccagtatggtccttcaggtaactac
ccacgccctcctaactatggcggagcaccaggtgccaactacagtggcccaggcccaggc
atgggcaacagtcttggcatgaatgccagcagtccaatgcacgggcagggtccagggcaa
ccctgtggctctttgaccacggctcgaggaccagggcatgcagctggtggccggccatat
ccagcaggctccagcagtgtggctccaacgtctcccaacatgcctcagtctgctggccca
ggaatgggtccacctcctcccaacgtcagtcgcaagccccacgagagtggccctgcatct
gcccagcagaacccagtcccctctggacagcccaggcatctctttggcaggtcccctgta
taccctggcctgtctgggcctgggggacggccagcctccttccctatccctcacccccat
caccctcactacagttctgggcaaggccaggggcatcctcacactgagttgtatgggcca
gtcgggtatcagggtgggtcccacatgcttgggatgggtcctggaggcccctacaaccat
ccaccgagcaacagcgcagccaggatgacccctcaaggaccgtcctacaacacagtgccc
acagggcccatggcaggctcaggtgacagcatgatgcccaccgatcccaaactgagagct
gagcacaaggaggagggcagcacacccaccacagagcctcctaagccaaaggacaactac
ggctctcagtgtgtgtcccagcctcccaccccgtcccctctgtcccccagcccagctagt
ctgtcctcttatcagggggacgacagtgatagcattagcagccctgcctggccaaaaaac
cccagcagccctaagcacagctcggggaacatgacaaacgagaagataacacggctgtat
gacttgggctgtgagccggagaggagggcatgggtggatcgctacatcgccttcatggag
gagaggggcacacctgtcctaaacctgccttcagtggggaagaagccactggacctgtgc
cgcctctacctctgtgttagagaaatcggaggcttggctatggtaaataagaacaagaaa
tggagagagctgtccacccacctgaatgtggggacatccagcagctctgccagttccctc
aagaagcagtacatccaatacctgttcgcctatgagtgcaaggtggagcgcggagaggaa
cccccacctgatgtgttcactgtggcagagagcaagaagcagccgcagcaggccaagatc
cagccgccctcacctgcaaactcgggctctcttcaagggccacagactcctcaatctaca
ggcagcagcactatgacagagatgccaggagacctaaagccaccaacaccagctaccaca
ccccacggacaagtgacccctcagccaagtggcagaaacagtggtgttagtgtgcaagat
ccgttctctgaaagcagtgacccagcctttcaaaagcgaggccccatgcatggaggaggc
agtggagatgccagctctagaatgcagtttgacaccagtaaggatccctatggagctgct
aggaaaggtggctctgagccctttatgccagggcagatgccaggcagtggcatgcaggag
atgtatccacgtggaccgccctcaggcatgggtatgggcccacgaccccagtactcctat
aacactggttttgagaggaggccagagcatgtcatgggtccagaggggggaattggcccc
tctggaaatcagaacaacatggtgctttccaacagtgatcccagcatgttctcaggcagt
agatacgcctctcatcagagacatggacatgacggctatgggcagcagtaccctcacagt
atgccatatggtgcacatgggatgtatgcccaacagcagggttataagcggcctggggaa
gggatgtatggccctcctgctaagcgccatgagagtgaagcctatggtatgcagtacggt
ggccagcagcctgacatgtatagccaatatggttacccagagcgtaggcccatgcaaggc
ccattcccctatcaatatggacgcgatcgcatgcagccaggtgggcagggacctcctcag
cacagcatgatgagtggtggaccacccccatcctccaattccagcggtggtcctcagggg
aacatgtggcacaccaggcatgacatgagttacccttaccctggccggcagggtcatggg
gccccctacccctccatgagccgtggagatgatccagaagtcagggccagtcaggacagt
cagtggcctggtcagcgtcaatccccctacccaccacactcttcgtcctccgctagctcc
atgccccccatggcaagccggcaaccaccttcttcctaccagtctcctccagcaatgcca
aaccatatctctcgagtcccaagccccgcaccattccctcggtctgtgggtggctctatg
tcacccaataaagctcatatgatggcctctatgaagcagatgcaaaagccaggtggccca
agctctcaaagtggtggtcttcctgggcaaggcttcccagcaatccatcgggaggtcact
tacccattagactccgtggagggaacgcagcctcagcttaaaccccaccgaaggttaaca
tccaaagaaatcggcacaccagaggcatggcgtgtaatgatgtccctgaagtctggtttg
cttgctgagagcacatgggccctggacacaataaacatcttgctatatgatgacaacaca
gtttcttcctttggcctatctcagttgcccggtttcttggagctcgttgttgaatatttc
agaaggtgcttaatagagatcttcgggatccttgaggaatatgaaatcggaacagtgggt
cagaaaactcttcttggtccatgttcggaacccacagaaaaagagcaaccttccaatcaa
gaccttaaaagccaatccaataaagatcaggtggagagattagatgtggagcctgagaaa
cctcagccaagcagctcagcagcagaacttaatatggagaaaagggaagactctgcagaa
ggtaaggccgacgaaaagaacactggtaaagaaccatgtcctccagtggagcctagaccc
aagcaagccagtaagtatgacaaactcccagtgaaagttgaggagagagaggctgtggct
gattgtgtggaggatcgatcagaactgctaggcctggctggggagttcaccagtgggctc
ctgcattggaaagcaggtggaggggactctactgcccacatccagacccatctcgagaga
cgtagggaagaagaacagaagccttcagagaatcaggaaggtgtacaggctcttagtaaa
gaaacagttgaagaagagcacgggagggaaaaggaactgaaaagagaacttccagggccc
tcagaggaaaacttgacagccactgtggatgacatgctaagttctcgtccagggtcccta
tcagagggtgaaactcagacattccccttccgcaacagagagaaacagagcaccattact
ttgctggaagatgagccccgatgctgggatgaagcacctctttcgatcgccgagggctgg
caggatgagttggccaagcgctgcatgtgtgtgtccaatatcattcgtggactctccttt
gtcccgggcaatgacagcgaattggctcggcacccaggtttagtgctcattcttggaaaa
cttgtgcttctgcaccatgagcaccctaaaagaaaaaggatgccccctacctaccagcga
gaggaagagcgaggactggcttgcagcaaggacgaatggtggtgggactgccttggtgcc
ttgcgtgagaacaccttggtcacccttgccaacatttcaggacagctagacctgtctatc
tatccagaaagtatctgccttccaattctggacgggcttctccactggatggtgtgccct
tcagcagaggcccaggaccccttttgcacggcaaatggcttctcctcgctcacaccacag
aggctggtgctggagtgtctgtgcaaactgagcattcaagactctaatgttgaccttcta
ctggccacgcctccttttagccgacaggagcgcctctttgccacattagtgcggcacgtt
ggtgaacgaaagagtcaggtgtgccgcgagatggcagtagccattctctccaatcttgca
cagggtgacccaacagctgcccgatccgttgccctgcagaagggcagtgtgggagccttg
ataaatttcctagaggacagtgttgccatggcacagtatcagcagagccctcacagtctc
ttgcacatggcacaccccacccaacccgagccgcccagcatcaacatgatgtgccgagcc
gccaaagccctgctggccatggcccaagtggaggagaacaggcctgagtttgtgctctac
gagagcaggcttcttgatatctcgctgtcctccgtgctgaactctggtgtggcagccatc
ctgtgtgaggtactgtttaagctcggtcgctcgtga
DBGET
integrated database retrieval system
