Cyprinus carpio (common carp): 122145611
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Entry
122145611 CDS
T05134
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
122145611
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122145611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122145611
NCBI-ProteinID:
XP_042615840
UniProt:
A0A8C1AJ96
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All DBs
Position
A7:complement(15671367..15674754)
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AA seq
289 aa
AA seq
DB search
MYSMMEYELKTAGQPHPHHNSPGMSPQVSGAGNAHHGSKTSCPPGGDPMDKVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDTEKRPFIDEAKRLRAVHMKEYPDYK
YKPRRKTKALLRKDNPVGKYPLAAGSLLASAVAQGQGGSPRMDGYGWGHTGAYMGMQGEA
LGYPQQLHRYDLSALQYPPAQTYMNGASSYSQMSYGGSPQQPSPVMSMVKSEPLSHSPTG
HHRGAFQGDLRDMISMYIPSGDTSDSSNQRTYPGVQQHYLGGTVPLTHI
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggaatatgaactgaagaccgcgggtcaacctcatccccaccacaac
agtccagggatgtctcctcaggtcagcggggctggaaacgcgcaccacggatcaaaaacc
tcttgtccacccggcggggaccccatggacaaagtgaagcgccccatgaatgcgtttatg
gtgtggtcccggggtcagcggagaaagatggcacaggagaaccccaaaatgcataactcg
gagataagcaaacgcctcggggcggagtggaagcttttaacggacaccgagaagcggccg
ttcatcgatgaggccaaacggttgcgggccgtacacatgaaggaataccccgactacaaa
tacaaacctcggcgcaagaccaaagctctcctcaggaaggacaatcccgtcggtaaatat
cctctcgcagccgggagcctgctggcatcagccgtggcacagggacaaggtgggagcccg
agaatggacggctatggctggggtcacaccggcgcttatatgggaatgcagggtgaagca
ctcggatacccgcaacagctgcaccggtacgacctatcagctctccagtaccccccggca
cagacgtacatgaacggcgccagctcttacagccaaatgtcatatggtggcagccctcag
cagcccagtccagtgatgtctatggttaaatcagaaccactatcccattcgcctactggc
caccaccgtggggctttccaaggggacctgagggacatgattagcatgtatattccaagt
ggtgataccagcgatagctcaaaccagagaacctaccctggtgtccaacagcactatctt
ggtggaactgttcccctcactcatatctga
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