Cyprinus carpio (common carp): 122145655
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Entry
122145655 CDS
T05134
Name
(RefSeq) sonic hedgehog protein A-like
KO
K11988
sonic hedgehog
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122145655
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccar01002
]
122145655
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
122145655
Peptidases and inhibitors [BR:
ccar01002
]
Cysteine peptidases
Family C46: hedgehog family
122145655
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Morphogens
122145655
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
DHQS_2nd
Peptidase_M15_3
Vint
VldE
Hom_end_hint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
122145655
NCBI-ProteinID:
XP_042616458
UniProt:
A0A9Q9YA56
LinkDB
All DBs
Position
A7:24267779..24274190
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AA seq
418 aa
AA seq
DB search
MRFMTRVLLVSLLSLSLVVSGLACGPGRGYGRRKHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSALVALKDGRQKAVKDLNPGDKVLAADGNGKLVYSDFIM
FTDRDSATRRVFYVIETKEPVEKITLTAAHLLFVLDNSTDDLHSMTAAFASSVRAGQKVM
VVDDSGQLKSVIVERIYTEEHQGSFAPVTAHGTIVVDRILASCYAVIEDHSLAHLAFAPV
RLYYDVSSVLFPKNFISQSNATLQQEGVHWYSKLLFQIGAWLLDSRMLHPLGMSVNSS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttatgacgcgagtgctgctggtgtcacttctcagtctgtccttggtggtgtcc
gggctggcctgcggtcctggcagaggctacggcagaagaaaacatccgaagaagctgaca
cctctcgcctacaagcagtttatacctaatgtcgcggagaagaccttaggggccagcggc
agatacgagggcaagatcacgcgcaattcggagagatttaaagaacttactccaaattac
aatcccgacatcatctttaaggatgaggagaacacgggcgcggacagactcatgacacag
agatgcaaagacaagctgaactcactggccatctctgtaatgaaccagtggccaggggtt
aaactgcgtgtgacagagggctgggatgaggacggtcaccattttgaagaatcactccac
tacgagggaagggctgttgatatcaccacctctgatcgagacaagagcaaatatgggaca
ctctctcggttagctgtggaagctggatttgactgggtctattacgagtccaaagcccac
atccattgctctgtcaaagcagaaaattcggttgcggcgaaatctggaggctgcttccca
ggttcggctctggtcgcgctcaaagacgggagacagaaagccgtgaaggacctgaaccca
ggtgacaaggtgctggcggcggatggcaatgggaagctcgtgtacagcgacttcatcatg
ttcacagaccgagactccgcgacgcgacgcgtgttttacgtgatagaaacgaaagaaccc
gttgaaaagatcaccctcaccgctgctcacctcctttttgtcctcgacaactcaacggat
gatctgcactccatgaccgccgcgtttgccagcagtgtcagagccggacaaaaggtgatg
gttgttgatgatagcggtcaacttaaatctgtcatcgtggagcggatatacacggaggag
caccagggctcgttcgcaccagtgactgctcatggaaccattgtggtcgatagaatactg
gcgtcctgttacgccgtaatagaggaccacagtctcgcgcatttggccttcgcgcccgtc
aggctctattatgacgtgtcatcggtcctattccccaaaaacttcatcagtcagtccaat
gcgactttacaacaggaaggagtccactggtactccaagctcctgtttcaaataggagcg
tggcttttggacagccgcatgcttcatcctttggggatgtcagtaaactcaagctga
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