Cyprinus carpio (common carp): 122146140
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Entry
122146140 CDS
T05134
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122146140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
122146140
03110 Chaperones and folding catalysts [BR:
ccar03110
]
122146140
03029 Mitochondrial biogenesis [BR:
ccar03029
]
122146140
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
122146140
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
122146140
Messenger RNA biogenesis [BR:
ccar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
122146140
Chaperones and folding catalysts [BR:
ccar03110
]
Heat shock proteins
HSP60 / Chaperonin
122146140
Mitochondrial biogenesis [BR:
ccar03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
122146140
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122146140
Exosomal proteins of other body fluids (saliva and urine)
122146140
Exosomal proteins of breast cancer cells
122146140
Exosomal proteins of colorectal cancer cells
122146140
Exosomal proteins of bladder cancer cells
122146140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
122146140
NCBI-ProteinID:
XP_042619825
UniProt:
A0A8C2A8F5
LinkDB
All DBs
Position
A9:complement(18462067..18469582)
Genome browser
AA seq
618 aa
AA seq
DB search
MKNTCEFSVTAAALKRLLFLYHSQSAVLTDTRILSFTSRSLCKMLRLPSLMKQMRPVCRA
LAPHLTRAYAKDIKFGADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPKVTKDG
VTVAKSIDLKDRYKNIGAKLVQDVANNTNEEAGDGTTTATVLARAVAKEGFDTISKGANP
VEIRRGVMMAVEEVINELKKLSKPVTTPEEIAQVATISANGDTEVGTIISNAMKKVGRKG
VITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKCEFQDAYLLLSEKKISSVQSI
VPALEMANQHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQLQDMA
ISTGATVFGDEAVGLAIEDIQAHDFGRVGEVIVTKDDTMLLKGRGDAAAIEKRVNEIAEQ
LESTNSDYEKEKLNERLAKLSDGVAVIKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIV
LGGGCALLRCIPALDNIKPANNDQLIGIDIIRRALRIPAMTIAKNAGVEGSLVVEKILQS
APEIGYDAMNGEYVNMVERGIIDPTKVVRTALLDAAGVASLLSTAEAVVTEIPKEEKDMP
AGGMGGMGGMGGMGGMGF
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacacatgtgagttcagtgtaactgcggcagcgctaaagcggcttctcttctta
tatcactcacagtctgctgtgctgacggacacgcgcatcctttcattcacctccagatca
ctctgcaaaatgctgcgtttaccgagtttgatgaaacagatgaggccagtgtgcagggcg
ctggccccacacctgacccgtgcatatgccaaggacatcaagtttggagcagatgcccgg
gctctgatgctccagggcgttgatctgctggctgatgctgtggccgtcaccatgggacca
aagggtcgcaccgttatcattgagcagagctggggcagccccaaagtcaccaaagatggt
gtcacagttgccaaaagtatcgatctgaaggataggtataagaacatcggggcgaagctg
gtacaggatgtggccaacaatactaacgaagaggctggagacggcaccacaaccgccaca
gttttggcccgtgctgttgccaaggagggatttgacaccatcagcaaaggcgccaaccct
gtggagatccgcagaggagtcatgatggcagtggaagaagtcatcaacgaactcaagaaa
ctctccaagccggtcacaactccagaggaaattgctcaagtggctactatttctgccaat
ggagacactgaagttggtaccatcatctccaatgctatgaagaaagtgggccgcaagggt
gttattacagtgaaggatggtaaaaccctacatgatgagcttgaaatcattgagggcatg
aagttcgaccgtggctacatttctccttacttcatcaacacagctaaaggccagaagtgt
gagttccaggatgcttacttgcttctgagtgagaagaagatctccagtgtacagagcatc
gtgccagcactggaaatggccaaccagcatcgcaagcctctggtcatcattgctgaagat
gtggacggagaggcactaagcactctggtcctcaacaggttgaaggttggacttcaggtc
gttgcagtcaaggctccaggattcggtgacaacaggaaaaaccaactgcaggatatggcc
atttccactggagccacggtgtttggtgatgaggctgtgggtctggccattgaagatatc
caggctcatgactttggcagagtcggagaggtcatcgtgacaaaggatgacacgatgctc
ctcaaaggccgcggtgatgcagcagccattgaaaagcgtgtgaatgagatcgctgaacag
ctggagagcacaaacagtgactacgagaaggagaaactcaacgagcgtctggccaagctc
tctgatggagtggctgtgattaaggttggaggaacaagtgacgttgaagtgaatgagaag
aaagaccgtgtcactgatgcactgaacgccactcgagctgctgtggaggagggaatcgtt
cttggaggaggatgtgccctgctacgctgcatcccagccctggacaacatcaagccagcc
aataatgatcaactgattggtatcgacattattcgcagagcgcttcgtattcctgcaatg
actattgccaagaatgcaggagttgagggctctctggtggtggagaagatcttgcagagc
gctccagagattggatatgatgctatgaacggagaatatgtaaacatggtcgaaagagga
attattgaccccacaaaggtcgtgaggactgcgttgctagatgctgcaggtgttgcatct
ctgctgtctactgctgaagctgtagtcactgagataccaaaggaggagaaggacatgccg
gctggaggaatgggtggaatgggaggcatgggaggcatgggtggcatgggattctaa
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