Cyprinus carpio (common carp): 122147965
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Entry
122147965 CDS
T05134
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122147965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccar03009
]
122147965
Enzymes [BR:
ccar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
122147965
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
90S particles
Other 90S particles
122147965
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
122147965
NCBI-ProteinID:
XP_042628174
UniProt:
A0A8C1L691
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All DBs
Position
A16:complement(6191754..6193489)
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AA seq
238 aa
AA seq
DB search
MAAHAGDKRGLEHLDEYDPKPAKQQKSLHEQMAEKRLVVVLEGATLETVKVGKTFELLNC
DQHKSMIIKSGRDPGKIRPDITHQCLLMLLDSPLNRAGLLQVYIHTEKNALIEINPQTRI
PRTFARFCGLMVQLLHKLSVRAADGPQRLLRLIKNPVSDHLPPGCPRYSTSFKAGDAVCP
RTIVPEDGPAAVVIGAFAHGTVNIDYTEKTVSISNYPLSAALTCAKMCSAFEEVWGVL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacacgctggagacaagcgtggtctggagcatttagatgaatatgatccaaaa
ccggcaaaacagcaaaaaagtttgcacgagcagatggcggaaaagcgtcttgttgttgtt
ttagaaggagcgacgctagaaaccgtaaaggttggaaagacatttgagttgctgaactgt
gatcaacataagagtatgatcataaaaagtggaagagaccctgggaagattcgccctgat
atcacacatcagtgtctgttgatgttactggacagtcctctgaacagagctggactgctt
caggtgtacattcacacagagaagaatgctttgatcgagatcaacccacagacgagaatt
cctcgcacttttgcacgcttttgtggactaatggtccagctgctgcacaagctgagtgtg
agagcagcagatggtcctcagcgtttgttgaggctgattaaaaatccagtatcggaccac
ctgccacctggatgcccccgatattcgacatcgttcaaagcaggagatgctgtgtgtccc
agaacaattgtccctgaagatggacctgccgctgttgtcattggtgcatttgcacatgga
accgtgaatattgactacacagagaagacggtgtccatcagtaactatcctctgtctgca
gctctgacctgtgccaagatgtgttcagcgtttgaggaggtctggggagtgttatga
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