Cyprinus carpio (common carp): 122148929
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Entry
122148929 CDS
T05134
Name
(RefSeq) collagen alpha-1(X) chain-like
KO
K19479
collagen type X alpha
Organism
ccar
Cyprinus carpio (common carp)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
122148929
NCBI-ProteinID:
XP_042633298
UniProt:
A0A8C2F8V5
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Position
A20:complement(2715017..2719625)
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AA seq
659 aa
AA seq
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MDLRVTSILLLLVVLAEATPERYYHVRKQPYPTKSETVAGEPGIPGAPGEPGAPGLPGPP
GIPGKNGVGHPGPIGPPGPPGPAGYSSPGKPGSPGSPGKPGAPGIPGEKGYPGPAGPQGA
RGVPGSPGSPGPSGISAPGKPGPHGLPGAMGPRGESGLKGHPGIPGLPGQKGEPGHGISG
APGGQGPMGPQGPPGQPGQPGVGKPGPSGFPGEPGKSGMPGRDGSPGPMGIPGPKGHTGA
PGIGAPGKPGLNGAPGMSGPIGQKGPQGPAGQPGAPGLPGIGKPGPTGLPGERGVPGTSG
TTGQKGEPGPMGHTGQPGAIGQIGPAGPQGARGFQGEHGPQGAKGDIGLVGAPGLRGAKG
EQGAQGFSGKPGIPGAAGPPGPIGHMGHQGPKGEPGFTGAPGIPGSKGPPGEKGHTGFQG
PTGARGENGIPGARGPTGPVGPAGPPGLKGHPGHPGPPGPAGITAKGISGPQGPPGIPGA
RGHDGLPGQPGPAGPPGPPGEIVYHYEKSMPIKSHEMVMPVSHELMKAPMSAFTALLTTA
YPNAGTPIAFNQVVYNGENHYDPNTGIFTCQVPGLYYFSFHMHVNGANALVALYKNREPV
MFSYDEYNKGFLDQMSGSTVLMLHSHDTVYIQVPDDQSNGIYADDNVHCSFSGFLIAST
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggacctcagagtaacaagcattcttcttcttcttgtggtactggctgaggccacccct
gaaagatactatcatgtgaggaaacagccttatcctacaaaatctgaaactgttgctggt
gaacctggtattccaggtgccccaggtgaacctggtgcccccggcctacctggcccacca
gggattcctggaaagaatggagttggacaccccggtccgattggtccacctggaccacca
ggtccagcaggctactcctcacctggtaaacctggaagcccaggttcacctggaaaacca
ggcgcacctggaattccaggcgagaagggatatccagggcctgcaggacctcaaggtgca
agaggagtgccaggatcacctggaagccctggaccttctggcatttctgctcctggaaag
cctggaccacacggtcttccaggagcaatgggcccacgtggagaatctggcctaaagggt
catcctggaattcctggactgccaggccagaaaggagaacctggccatggtatttcagga
gcacctggtggccaaggtccaatgggccctcagggacctcctggtcagccaggtcagcct
ggagttggaaaacctggaccaagtggatttcctggagagcctggaaagtcaggaatgcca
ggtagggatgggtcaccaggtcctatgggaatcccaggaccaaagggtcatacaggggca
cctggaataggagcaccaggaaaaccaggcctgaatggcgctccaggtatgtctgggcca
ataggacaaaaaggtcctcaaggaccagcaggacagccaggcgctccaggtctgccaggt
attggcaaacctggaccaactggacttccaggagaaaggggagtgcctggaacctcagga
acaacaggccaaaagggagaaccagggccaatgggtcacacaggtcagccaggtgctatt
ggtcaaataggtccagcaggtcctcagggtgctaggggattccagggagaacatggtcca
cagggagctaaaggtgatattggtttggttggagcaccaggcttaagaggtgcaaaaggt
gaacaaggtgcacaaggcttctcaggaaaacctggtattccaggtgcagcaggtccacca
ggtccaataggtcatatggggcatcagggtcccaagggtgaaccaggatttactggtgca
ccaggtatcccaggtagcaaggggccaccaggagaaaagggacatacaggatttcaaggg
ccaacaggtgcaaggggtgaaaatggtatccctggagcaagaggaccaacaggcccagtc
ggacctgctggtccaccagggcttaagggtcatccaggacatccaggcccccctggccca
gcagggatcacagccaagggaatttctggacctcagggtcctcctggaattcctggtgcc
agaggtcatgatggtctcccaggtcaaccaggacctgctgggccacctggacccccaggc
gagattgtttatcattacgaaaaaagcatgccaattaaatcccatgagatggtaatgcct
gttagtcacgagctgatgaaggcacccatgtcagcattcacagctctgcttaccacagct
tatcctaatgctggaacaccaattgcattcaaccaggttgtatacaatggagaaaaccac
tatgatcctaacactggcatattcacctgtcaggttccaggactttactacttttctttc
catatgcatgtcaatggagcaaatgcattggtagcactttacaaaaacagagagccagtc
atgttctcatatgatgagtacaacaaaggtttccttgaccagatgtctggcagtactgtc
ctcatgctgcattcccatgacacagtgtacatccaggttccagatgaccagtccaacggc
atttatgctgatgataatgttcactgttctttctctggcttcttgattgcctcaacgtga
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