Kaistella carnis: EIB73_02370
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Entry
EIB73_02370 CDS
T06869
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
ccas
Kaistella carnis
Pathway
ccas02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ccas00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EIB73_02370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccas03021
]
EIB73_02370
Transcription machinery [BR:
ccas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EIB73_02370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
DUF6285
DUF7443
Motif
Other DBs
NCBI-ProteinID:
AZI32091
UniProt:
A0A3G8XTV2
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All DBs
Position
complement(524945..525811)
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AA seq
288 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQKIRAGDRVALEKLIKANLR
FVVSVSKQYQNQGLSLPDLINEGNLGLMKAAKRYDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKAYAHLEQENERPPSPEELAEVLDMSESDIKESMKNSGRHL
SMDAPLVEGEDSNLYDVLRSGESPSPDKDLMLESLQIEIERALQTLTPREADLVRLYFGL
NGKHPMTLEEIGETFDLTRERVRQIKEKAIKRLKHNTRSKILKSYLGK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagacaattaaaaattaccaaacaggttaccaacagagaaaccgcctctctcgacaag
tatttgcaagagattgggaaagttgatttgattacggccgacgaagaagttgaattggca
caaaaaatccgcgccggagatagagttgcgttggaaaaattgattaaagccaacctccgt
tttgtggtatctgtgtctaaacaataccaaaatcaggggctttctttgcccgatttaatt
aatgaagggaatttaggcttgatgaaagcggcgaaaagatatgatgagacccgaggtttt
aaatttatctcttacgcagtttggtggattcgtcaatcgattctacaggcattggcagaa
cagtcgagaattgtaaggttgccattgaataaaattggatcgattaacaagatcaacaaa
gcatacgcacatttggagcaggagaacgaaagacctccatccccagaagagttagcggaa
gttttggatatgagtgaatctgacattaaagaatcaatgaaaaactccggaagacacctg
tccatggatgcgccgttggttgagggtgaagattctaacttgtatgacgtattgcgttcc
ggtgaatcaccaagtccggataaggatttgatgctggaatctcttcaaattgaaatcgaa
agagcattacaaactttgacgccacgtgaggcagatctggttcgtttgtatttcggtttg
aacggaaaacacccgatgactttggaagaaattggagagacttttgacctgaccagagaa
agagttcgtcagattaaagaaaaagcaattaaaagattgaaacacaatacgagaagtaaa
attcttaaatcgtatttaggtaaataa
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