Kaistella carnis: EIB73_03230
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Entry
EIB73_03230 CDS
T06869
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccas
Kaistella carnis
Brite
KEGG Orthology (KO) [BR:
ccas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccas03032
]
EIB73_03230
03400 DNA repair and recombination proteins [BR:
ccas03400
]
EIB73_03230
Enzymes [BR:
ccas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EIB73_03230
DNA replication proteins [BR:
ccas03032
]
Prokaryotic type
DNA Topoisomerases
EIB73_03230
DNA repair and recombination proteins [BR:
ccas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EIB73_03230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Zea_mays_MuDR
Motif
Other DBs
NCBI-ProteinID:
AZI32254
UniProt:
A0A3G8XPS4
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All DBs
Position
715431..716540
Genome browser
AA seq
369 aa
AA seq
DB search
MDNPSLDLIAKISPSKIIKIMKDPVKSAKAVQLVYTNDSANEGIARKKRGKKFSYFLGEE
KLKDQEELERIKKLAIPPAWEDVWICALQNGHLQATGVDAKQRKQYRYHPVWNALRNHTK
FYRMLQFGEALPTIRLQLEKDLRHRKLDQRKVLAAVVSLMERTNIRIGNNIYEKLYGSFG
LTTLKDKHVEIKGDKMKFSFKGKKGVYHDIDLKNSKLAKAVKNCRDIPGKELFQFYDEEG
KRHAIESGMVNDYIKEISGEDFTAKDFRTWSGTVNALIAFNEIEKQEIEGNQKSKIKQAI
DMVACELGNTSTVCRKYYIHPLVINLYESDSIKKYLDELDDIEVDDGKSGLTKEELIVMK
ILKTEKPTI
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggataatccaagcctggatctgatcgcgaaaataagtccttcaaaaattattaaaata
atgaaggaccccgtaaaatctgcaaaagcagtgcaacttgtttacacaaatgacagtgca
aatgagggaattgcaagaaaaaagcgcggtaaaaaattctcttattttttaggagaagaa
aaactgaaggatcaggaggaattggagcgaattaaaaagctcgcaattcctccagcttgg
gaagatgtttggatctgcgctttacagaacggccatttacaagccacaggagtagacgcc
aaacagcggaaacaataccgctatcatccggtttggaatgctttgagaaatcataccaaa
ttttataggatgctgcagtttggggaagctttacctacgatcagacttcagcttgaaaaa
gatttacgtcatcgcaaacttgaccaaagaaaagttttggccgcggttgttagtttgatg
gaaagaaccaacatccgtatcggaaataacatttatgaaaaactttatggctcatttgga
ttgaccactttaaaagataaacatgtagagatcaaaggtgataaaatgaaattttctttt
aaaggaaagaaaggtgtttatcacgatatcgatttaaaaaactcgaagttggcaaaagcg
gtgaaaaactgtcgggatattccgggaaaagagctgtttcagttttatgatgaggaaggc
aagcgtcatgcgatcgaaagtggaatggtgaatgattacatcaaagaaattagtggtgaa
gattttaccgcgaaagattttcgaacctggtccgggactgtgaatgctcttattgccttt
aatgaaattgaaaaacaggaaattgagggaaatcaaaaatcgaaaattaagcaggccatc
gatatggtcgcctgtgaattgggaaatacgagtacggtttgccgaaaatattatattcat
cctttagtcattaatctttatgaaagtgattcgatcaaaaagtatcttgatgaattggac
gacattgaagttgatgacggtaaatcgggacttacaaaagaggaactcatcgtcatgaaa
attttgaaaacagaaaaaccaaccatttag
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