Kaistella carnis: EIB73_03395
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Entry
EIB73_03395 CDS
T06869
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ccas
Kaistella carnis
Pathway
ccas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EIB73_03395 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccas03019
]
EIB73_03395 (recQ)
03400 DNA repair and recombination proteins [BR:
ccas03400
]
EIB73_03395 (recQ)
Enzymes [BR:
ccas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EIB73_03395 (recQ)
Messenger RNA biogenesis [BR:
ccas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EIB73_03395 (recQ)
DNA repair and recombination proteins [BR:
ccas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EIB73_03395 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AZI32284
UniProt:
A0A3G8XPV8
LinkDB
All DBs
Position
complement(756064..758268)
Genome browser
AA seq
734 aa
AA seq
DB search
MNTIPTDLSKELKKYFGFSTFKGHQETIIKTLLKGEDVFVLMPTGGGKSLCYQLPALISK
GTAIVVSPLIALMKNQVDAINGLSSVEGIAHVLNSSLNKTQTKQVFDDIKSGVTKLLYVA
PESLIKEEYLEFLKEVPISFVAIDEAHCISEWGHDFRPEYRNLKTIIDKIADVPVIALTA
TATPKVQDDIQKTLGMSNAVVFKESFNRPNLFYEVRPKVNIDREIVKFINARKGKSGIVY
CLSRRKVEEFAQVLQVNGINALPYHAGLDQKTRVMNQDKFLMEDADVIVATIAFGMGIDK
PDVRFVIHYDIPKSLESYYQETGRAGRDGGEGYCLAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYVETSMSRRQYILYYFGEQFDPENGLGAKMCDNATNPPTLKDASKELAIV
LKLVKDLEEKFKTKDLIAVIVGKENPVTKSYKLETTKHFGIGKKESENFWKSIIRQATVQ
NFLQKDIETYGVLKLTEKGQKALKEKKDHVFFIAEDREYNLEQTKAASEKEQGQAGGGLD
EALFAQLKELRKTIAKKQGKPPYTIFMDPSLEDMTVQYPITVQEIGNIYGVGDGKAKKYG
KEFAEFIKKYVEENNIERTQDMVMKTVANKSSHKVFIIQSTDKKIDLEDIAKAKNLSMDD
LLKEMERIVYQGTKLNVDYYIDENFDEDIVEEFMTFMGESESDSMKILLAEFGDDLSDEE
VRMLRIKFISDVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaatacccaccgatttatcaaaggaactcaaaaaatatttcggtttttcaaca
tttaaaggtcatcaggaaacaattattaaaaccttactcaaaggtgaagatgtatttgtt
ttaatgccgaccggcggtggcaaatctctttgttatcagcttcccgccctaatttctaaa
ggaactgccattgtggtttctcccttaatagctttgatgaaaaatcaggttgatgcgatt
aacgggctttcttcagttgaaggaattgcgcacgttctgaattcttcgctgaacaaaacc
caaacaaaacaagtttttgacgatataaaatccggagtgacaaaattattatacgtcgct
ccggaatctttaattaaagaggaatatttagaatttctgaaagaagttcctatttctttt
gtagcaattgatgaggcacactgtatttcagaatggggtcatgatttccgcccggaatat
agaaacctgaaaaccattattgataaaattgcagatgttcccgtgattgctttaacggca
actgctactccgaaggttcaagatgatattcagaaaactttgggaatgagcaatgctgtt
gtttttaaagaaagttttaacagacccaatttattttatgaagtgcgaccgaaggtgaat
attgatcgggaaattgtaaaattcatcaatgcaaggaaaggtaaatctgggattgtttat
tgcctgagtcgtagaaaagtagaggaatttgctcaagttctgcaagttaatgggattaat
gctttgccctatcacgcaggtttagaccaaaaaacacgcgtaatgaatcaggataaattc
ctgatggaagacgccgatgtaattgttgcaactattgcgtttggaatgggaatcgataaa
cccgatgtgcgttttgttatccattacgatattccaaaatctttggaaagctattatcag
gaaacaggtcgtgccggacgagacggaggagaaggttattgtctggctttttacgatcca
aaagatattgaaaaacttgaaaaattcctggctcaaaaacccgtttctgaaagagaaatt
ggattgcagctcttgaatgaggtcgtaggttatgtggaaacttctatgagtcggcgacag
tacattctatattatttcggcgagcagtttgatccggaaaatggtttgggcgcaaaaatg
tgtgacaatgccaccaatccgccgaccttgaaggatgcctcaaaagaactggcaattgta
ttgaaacttgtcaaagatctggaagagaaatttaagaccaaagatttaattgcagtcatt
gtcgggaaagaaaatcctgtaactaagtcgtataaattagaaactaccaaacatttcgga
atcgggaaaaaagaatcggagaacttttggaaatcaattattcgccaggccaccgttcag
aatttccttcaaaaagatattgagacttatggtgttcttaaattaactgaaaaaggccaa
aaagcattaaaggagaaaaaggatcatgtcttttttatagctgaagatcgggaatataat
cttgaacaaactaaagcagcatcggagaaggaacaggggcaagcaggcggaggattggat
gaagcattgtttgctcagttaaaagaattacgcaaaacgattgcgaaaaagcagggaaaa
ccgccttataccattttcatggatccgagtttggaggatatgaccgtacaatatcccatt
acggtgcaggaaattggcaatatctatggagtaggagatggtaaagcgaagaaatatggg
aaagaatttgcagaatttatcaaaaagtatgtagaagaaaacaatatagagcgaacgcag
gatatggtgatgaaaacggtcgccaataaatcttcgcataaagtttttatcattcaaagt
accgataaaaaaatcgatctggaagatatagccaaggctaaaaatctttcgatggatgat
ttgttgaaggaaatggaacggattgtttatcagggaactaagttgaatgttgattactat
attgatgaaaactttgatgaagatattgtagaggaatttatgacattcatgggcgagagt
gaaagtgacagtatgaagatccttttagcagaattcggtgacgatttgagtgatgaggaa
gtaagaatgttgagaattaaatttatttcagatgtagccaattaa
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