Kaistella carnis: EIB73_08465
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Entry
EIB73_08465 CDS
T06869
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ccas
Kaistella carnis
Pathway
ccas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EIB73_08465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccas03021
]
EIB73_08465
03400 DNA repair and recombination proteins [BR:
ccas03400
]
EIB73_08465
Enzymes [BR:
ccas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EIB73_08465
Transcription machinery [BR:
ccas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EIB73_08465
DNA repair and recombination proteins [BR:
ccas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EIB73_08465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AZI33205
UniProt:
A0A3G8XI86
LinkDB
All DBs
Position
complement(1832899..1833894)
Genome browser
AA seq
331 aa
AA seq
DB search
MAILTFIKPDKVILLNSDEFKGQFEFRPLESGFGLTIGNALRRVLLSSLEGYAISSIKIE
GVEHEFSTIPGVIEDVTEIILNLKQLRLRAKNETATAEVVTAKVSGQNTVTAGDLGKSMQ
EFEVLNPDLVICSTNKDVKFEITFNIEKGRGYVPSDQNKSANAPIGTIAIDSIFTPIKKV
QYSVENYRVEQKTDYEKLVLDIETDGSISPQNALTEASKILIYHFMLFSDERITLETEAV
KASIQYDEETLHTRQLLKSKLVDMDLSVRALNCLKAAEVETLGELVSYTKSDLMKFRNFG
KKSLTELEELVHAKGLNFGFDVAKYKLDADK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttaacatttattaaacccgataaagtaatacttcttaactctgatgaattc
aaagggcaatttgaatttagaccattagagtcaggatttggacttacgatcggtaatgct
ttgaggagagttttactttcttctcttgaaggatatgctatttcatctatcaaaatagaa
ggcgtagagcacgaattttcaactattccaggggtaattgaagatgttacagaaatcatt
ctgaacctaaaacaattaagactaagagctaaaaacgaaactgcaaccgcagaagtagta
acagctaaagtttctggacaaaatacggtaacagctggcgatttaggaaaatcaatgcag
gaattcgaagttttgaaccctgacttggtgatctgttcgaccaacaaagacgtgaaattt
gaaatcacgtttaatattgaaaaaggaagagggtatgttccttcagatcagaataaatca
gcgaatgctcctatcggaactattgcgattgattcaatctttactccaatcaagaaagta
cagtacagtgttgaaaactatcgtgtcgagcaaaaaacagactacgaaaaactcgttttg
gatattgaaactgatggttccatcagtcctcaaaatgctttaactgaggcgtctaagata
ttaatttatcatttcatgttgttctccgatgagagaattactttggaaactgaagccgta
aaagcatccattcagtacgacgaagaaactttacatacaagacaactccttaaatcgaaa
ttagtagatatggatctgtcggtaagagcactaaactgcttgaaagctgctgaagttgaa
actttaggagaactggtttcttacaccaagtctgatttgatgaaattcagaaatttcggt
aaaaaatctttaacagaattagaagaattagtgcatgcaaaaggtcttaacttcggtttc
gacgttgctaaatataaattagacgctgataaataa
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