Kaistella carnis: EIB73_09415
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Entry
EIB73_09415 CDS
T06869
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ccas
Kaistella carnis
Pathway
ccas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EIB73_09415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccas03021
]
EIB73_09415
03019 Messenger RNA biogenesis [BR:
ccas03019
]
EIB73_09415
Transcription machinery [BR:
ccas03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EIB73_09415
Messenger RNA biogenesis [BR:
ccas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EIB73_09415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
AAA_22
AAA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AZI33386
UniProt:
A0A3G8XYP0
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All DBs
Position
complement(2025579..2027417)
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AA seq
612 aa
AA seq
DB search
MFNIETLRSKSDTDLTKITSDLGVKLAKNSTENDKIFAILDFQASNTKVAKEYFNATESP
MNTEEPKVPAPKKPAAKKAAPKKKVEKPTEVSEELAPKVATVESTEESNEKKPAGNEEVG
EVKATNTNQQKKKRQRVTPPAKESSAENESEVKVKEVAEVVAETKPEQQKPQHQNQNQHS
NQNQNVNQNQNTNPNQSGNGNQSGNQNRPQHQSKNPNQNRNQNKNQNNGDSQEEPAKKEF
SFDGLVTIDGVLEILPDNYGFLRSSDFSYISSPDDVYVSTNQIRNYGLKTGDTVRGIVRL
PKEGEKYFSLLKPTEVNGRDLEFIKDRVAFEFLTPLFPEEKFNLTGKNATPSTRIVDLFT
PIGKGQRAMIVAQPKTGKTMLLKEIANSISANHPEAYMMILLIDERPEEVTDMERSVNAE
VIASTFDEPAEKHVKVANLVLSKAQRMVECGHDVVILLDSITRLARAYNTVTPASGKILS
GGVDANALHKPKRFFGAARNIEGGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQLD
RKIANKRIYPAIDLTSSSTRRDDLLLEDTVQQRMWILRKYLADMNPVEAMEFVNKSIKNT
LNNEEFLMSMNR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacattgaaacgttaaggtctaaatccgacacggacttgaccaaaatcaccagc
gatctgggcgttaaacttgctaaaaacagcaccgaaaacgacaaaatttttgctattctg
gattttcaagcttccaatacgaaagtagcaaaagaatatttcaacgcgacagaatcccct
atgaatacagaagaaccaaaagtgcctgctccgaaaaagcctgcagcaaaaaaagccgct
cctaaaaagaaagtggaaaaaccaacagaggtttctgaagaacttgctccaaaagttgcc
acagttgaatccacggaggaatcaaatgagaagaagccggctggaaatgaggaggtcgga
gaggtaaaagcaacaaatacaaatcagcaaaagaaaaaaagacagcgcgtaacaccgccg
gctaaagaatcttctgcagaaaatgagtctgaagttaaagtgaaagaggttgccgaagtt
gtagcggagacgaagccggagcaacaaaaaccgcaacaccaaaatcaaaaccagcattct
aatcagaatcagaacgttaaccagaatcaaaataccaatccaaatcaatccggaaatggt
aaccaaagcggcaatcaaaaccgaccgcaacatcaaagtaaaaatcctaaccaaaataga
aaccagaacaaaaatcaaaacaacggcgattctcaggaagagccggctaaaaaagaattt
agctttgacggtctggtaacaatcgacggcgtactggaaatccttccagataattacgga
tttcttcgttcttcggatttctcctacatttcttcgcccgacgatgtttatgtttcaacc
aatcagattagaaactacggactgaaaacaggtgatacagtaagaggaattgtaagattg
ccgaaagaaggggagaaatatttttctttattaaagccaacagaagtgaacggcagagat
ttagaatttattaaagaccgcgtggcattcgaatttttaacgccactttttccggaagaa
aaatttaatctaactggaaaaaacgcaacgccttctaccagaattgtcgatttatttaca
ccaatcggaaaagggcagcgtgcgatgatcgttgcacagccgaaaactggtaaaaccatg
ttgttgaaagaaattgcgaattcaatttcagccaatcacccggaagcctatatgatgatc
ttgctcatcgacgaaagaccggaagaggtaaccgatatggaaagaagtgtaaatgcagaa
gttattgcttccacttttgatgagccggcagaaaaacacgtaaaagttgcaaatttggtc
ttgtctaaagcacagagaatggtagaatgtggtcacgatgtggtgattttgttagattcg
atcacgcgtttagccagagcttataacacggtaacaccagcatccggtaaaattttatcg
ggaggagttgatgccaatgcattgcataaaccgaaacgtttttttggtgcggccagaaat
attgaaggcggtggttcattaaccattattgcaacagccttaattgatacgggttcaaaa
atggatgaggtgatctttgaagaatttaaaggaaccggaaacatggagttgcaactcgat
cgaaaaattgccaataagcgaatttatccggcaattgatttaacttcttcgagtacaaga
agagacgatttgctattagaagataccgttcagcaaagaatgtggatcttaagaaagtat
ttagcagatatgaatcccgtagaagcgatggaatttgtaaacaaaagcattaaaaatact
ttgaataatgaagagtttttaatgtcgatgaacagatag
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