Kaistella carnis: EIB73_11625
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Entry
EIB73_11625 CDS
T06869
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccas
Kaistella carnis
Brite
KEGG Orthology (KO) [BR:
ccas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccas03032
]
EIB73_11625 (topA)
03400 DNA repair and recombination proteins [BR:
ccas03400
]
EIB73_11625 (topA)
Enzymes [BR:
ccas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EIB73_11625 (topA)
DNA replication proteins [BR:
ccas03032
]
Prokaryotic type
DNA Topoisomerases
EIB73_11625 (topA)
DNA repair and recombination proteins [BR:
ccas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EIB73_11625 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AZI33795
UniProt:
A0A3G8XJW4
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Position
2492259..2494820
Genome browser
AA seq
853 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGKDFDVKSSFGHIRDLPKKGMGIDLNTFTPEYEVSVDKK
KIVTELKAAVKKVEMVWLASDEDREGEAIAWHLAQELKLKDENSKRIVFHEITKNAILKA
IENPRTIDQNLVNAQQARRILDRIVGFEMSPVLWKKVKVGLSAGRVQSVAVRLVVERELE
IRNFNSKSTFKLEGVFINNDHHEIAAKLKKDFPKEKEAEEFLTQCKGADFKVLNVETKPG
TRTASAPFTTSTLQQEASNRLGYGVTGTMRAAQRLYEEGYITYMRTDSVNLSQDAINGAK
AQIISEYGEEYSNPRNYKTKSASAQEAHEAIRPTDFSVKSIGDVQLNKLYQLIYKRTLAS
QMSNAKIEKTVIEIGNEKLPHHFEAQGEVIVFDGFLKAYGIVKAEDDDEENNEKLLPKVK
VGEALDYKKIEATEKFSRPPARYTEAGLVKKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IIPQEREIMKMTLGKSDLKKEVLTEKFGGDKNKFVPTDIGEVVNEFLTENFAEILDYGFT
AKVEQDFDHIANGDENWKEVLQGFYKDFHPRIEDVEENADRATGERILGVDPKTGKNVLT
RIGRFGPMVQIGEQDDEEKPVFASLMASQNIATITLEEALELFKIPFDLENFEGQTVTIG
VGRFGPYVKWGETFISIPRGEDPLSITQERAEEIIKEKKIADAPIASFKGEPVTKGTGRF
GPFIKYQSIFINVPKKYDFENLSQSDINELIEAKLEKEANRYIQQWPEEKISIENARWGP
IVKHGKNIFKIPKTSKDEKFTAEELADVSLDEVKKWITAQDKNAFKEKPKKKVVAKKPAA
KKAPAKKAAPKKK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaatttagtgattgtagaatcaccggctaaagccaaaacgattcaaaaatat
ttgggaaaagatttcgacgtgaaatcaagtttcggacacatccgcgatttgcccaagaaa
ggcatggggatagacttgaatacgttcacgccggagtacgaagtttctgtagataaaaag
aaaattgtgaccgaattaaaggctgctgtaaaaaaagtagaaatggtttggttggcttcc
gatgaggatcgtgagggtgaagcaattgcctggcatttggcgcaggaactgaaacttaaa
gatgaaaattctaaaagaatcgttttccatgaaattactaagaatgctattttaaaagcg
atagaaaatccgagaaccattgatcagaatttggtcaacgcacaacaggcgcgaagaatt
ctggatcgaattgtaggtttcgaaatgtcaccggttctttggaaaaaagtaaaagtggga
ttgtctgccggccgcgtgcagtctgttgccgttagattagtcgtagaaagagaattggaa
attagaaatttcaactcaaaatcaacttttaaattagaaggtgttttcattaataatgat
caccacgaaatagcagcgaaactcaaaaaagattttccgaaagaaaaagaagcagaggag
ttcttaacccaatgcaaaggcgccgatttcaaagtgctgaacgtagaaactaagccggga
acgcgtactgcttcggcaccttttacaacttctactttgcaacaggaagccagtaatcgc
ttaggatatggcgtgacaggaaccatgcgtgccgcccagcggttgtacgaagaaggttat
atcacctatatgagaaccgactccgtaaatctttctcaggatgccattaatggagcaaaa
gcgcaaattatttcagaatatggggaggaatattctaacccaagaaattataaaacaaaa
tctgcttctgctcaagaagctcacgaggcgattcgccctacagatttttcggtgaaaagt
attggagatgtacaactgaataaattatatcaattaatttataaaagaactttggcttcc
caaatgtcgaatgcgaaaattgaaaaaaccgtcatcgaaataggaaatgaaaagcttccc
caccattttgaagcgcaaggcgaagtgatcgtttttgatggtttcctgaaagcttacgga
attgtaaaagccgaagatgacgatgaagaaaacaatgaaaaattgttgccgaaagtgaag
gttggcgaagcgctggattataaaaaaattgaagcaacagaaaaattctcacgaccacct
gcacgatatactgaagcaggattggtgaagaaattagaagagttgggaattggtagaccg
tcaacttacgcgcctacgattcaaacgattcagaatcgcgagtatgttgataaaagagaa
ataattccgcaggaacgtgaaatcatgaaaatgactttgggtaaatcggatttgaaaaaa
gaagtgctgaccgagaaatttggcggtgataaaaataagtttgtgccgaccgatattggg
gaggtagtaaatgaattcttaactgaaaattttgccgaaattttggattatggttttacg
gcgaaagtagagcaggattttgaccatattgcaaatggagatgaaaattggaaagaagta
ttgcaaggtttctataaggattttcacccaagaattgaagatgtagaagaaaatgcagat
cgtgcaacaggtgaacgaattttaggcgtagatccgaaaaccggaaaaaatgttctgacc
aggattggcagatttggaccgatggtgcagattggggaacaggatgatgaagagaaaccg
gtttttgccagtttaatggcgtcccaaaatattgcgaccattactttggaagaagcattg
gaattgtttaaaattccgtttgatttagaaaatttcgaaggtcaaaccgtgacgatcggt
gttggtagatttggtccttatgtgaaatggggcgaaacattcatcagtattccgagaggc
gaagatccgctttcgatcacgcaggaaagagcggaagaaatcattaaggaaaagaaaatt
gcagatgcaccaattgccagttttaaaggcgaaccggtaacaaaaggaacgggtagattc
ggaccttttattaaatatcagtccatctttattaatgttccaaaaaaatatgattttgaa
aatctttctcaaagtgatatcaatgaattgattgaagccaaattagaaaaagaagccaac
cgatatattcagcagtggccggaagaaaaaatttctatcgaaaatgcaagatggggacct
atcgtaaaacatggaaaaaacatctttaaaattccgaagacttccaaagatgaaaaattt
actgctgaagaattagcagacgtatctttggatgaggtgaaaaaatggattacagcacag
gataaaaacgcctttaaggaaaagcctaagaagaaagtcgtggcaaagaaaccggcggca
aaaaaagcaccggcaaaaaaggcagctccgaaaaagaaataa
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