Ceratitis capitata (Mediterranean fruit fly): 101449199
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Entry
101449199 CDS
T07533
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101449199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101449199
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101449199
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
101449199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
101449199
NCBI-ProteinID:
XP_004535776
UniProt:
W8C6F5
LinkDB
All DBs
Position
Unknown
AA seq
296 aa
AA seq
DB search
MANISLSEAEKTFILHGVEEDFRCDGRSRRDYRPMELETDLVSNASGSARLRLANTDVLV
GIKTEIDKPNYLTPDQGKIEFFVDCSANAAPEFEGRGGEELALELADTLTNAYESPKAFD
LKLLCILPGQQCWKLFVDILILECGGNLFDAVSLAAKAALFNTKIPRVTAALMDAGEAEL
LISDDPYDCTRIPIGNLPILVTVCKIGDSCVVDPSAEEEECSIASVVVGVSKRKGKSYTS
NVHTIGEGSLHKDTMHNCVLLGLSAAESLNNELVKALKLEEERIGSKRRNIVGFLK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatatttcgttaagtgaagcagagaaaacatttatacttcacggcgtagaggaa
gatttccgttgtgatggacgatcgcgtcgtgactatagacctatggagttagaaactgat
ttggttagtaatgccagtggttcagctagattgcgattagcaaacacagacgttttagta
ggaataaagacagagattgataaaccgaactacctaactcctgatcaaggcaaaatagaa
tttttcgttgattgttcggcaaatgcagctcctgaatttgaagggcgaggtggagaagaa
ctggcattagaattggcagataccttaacaaacgcatatgaatccccaaaagccttcgac
ttaaaactactttgtattctgcctggtcaacaatgctggaaactttttgttgatattttg
attttagaatgtggaggaaatttatttgatgcagtatctttagcagcgaaagcagctttg
ttcaatacaaaaataccacgtgtaacagcggcgcttatggatgcaggagaagcagaatta
ttaatttccgatgatccttatgattgcacacgaataccaattggaaatttgcctatattg
gtaaccgtgtgcaaaataggggattcgtgtgttgtagatccatctgcggaagaagaagaa
tgtagcattgccagtgttgttgtgggggtctcaaagagaaaaggaaaaagttatacgtca
aacgtacacacaatcggagaagggtcattacataaggatacaatgcataattgcgtatta
ttgggcttatctgcggcggaaagcttaaacaacgaattggtgaaagctttgaaactcgag
gaagagcgcattggatcaaaacgtcgaaatattgtaggttttcttaaataa
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