Ceratitis capitata (Mediterranean fruit fly): 101449517
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Entry
101449517 CDS
T07533
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03013
Nucleocytoplasmic transport
ccat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101449517
03015 mRNA surveillance pathway
101449517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101449517
03041 Spliceosome [BR:
ccat03041
]
101449517
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101449517
Spliceosome [BR:
ccat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
101449517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
101449517
NCBI-ProteinID:
XP_004526804
UniProt:
W8C2T2
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
MMFTGTTQQQDTRFSDKEKKLMKQMKFGDCLNKRVDMSKVKLDVLRPWISKKITDILHIE
DDVVVEFVYNQLEEEKFPCPKKMQINMTGFLNGKNARQFMGELWSLLLSAQESESGIPAE
FIQQKKDEILKREEQQRQNDRSRSRDRDRERDRDRDRDNERDRDRDSRRSGRDRSNDGQR
DDMMSQREQQLPPSTLQAIEQVRSQLSAKSRSNSAEETNLGNISQSKHIEGGSAASASAA
AAAAAAAILRDRSRSPNANSRTAAAEAAASKIRNRSPRKRSRERSTTRKSSHERNSSPQR
RRNSPRDRRRSSRSPRRRSPGGDRRRRRSTRSRTRDRSVRRAASKKRQISRSLSPQKRQS
PKPRGRRSKDRRSRSRSRSRSKSPAKRKPSPAPNRNSKTANSSPYRKRSASRHSNPNTPV
NGHEDGGNAKKRDGRKRSPSPNPSESSRASPAEIRAAARIQSKGRSRSRSASKRSVRGAA
SSRSRSRSSSRSSRASVRSNKKVIRRSSSRNTSLSPSPERKEDFEIRRNKNSVQKKRHYR
HNRDSSASSIDRDRDRERDGGRRMMGDNRGRRGDMPGRRFSPHNRSPRIDGGGGRNQRSR
SRRRSKSRNRSRSRNRSRSPMRRSRSPRRFNRRRSPMMHFRGRGGGNNRGRMNFWRRSPS
WNRGGGGGGGGGRFDRRFSPQRRFSRERDRRMSPMQNQFRKFSPQRRFSPPQNMQYQRRS
RERRFSPGPRDRRPSSPIRDNSRDRGGGGNNFNRWDQNNRNVPKPKSRSSSSNWELDDEQ
APQGVARKSSVAKETSPIKNNGDRSRSVRRSRDRSDRDSSQSSEKIPKARESSGRRSSVE
YTGPSVKTIDLSKEERSEYRKSKAESAQRESIQVKKQAPPAVAPTAALTIRNEKLRARYS
SSLSRTPSPFLKPHEREKLQANSGKKPQEKKPQKSHKESYSSSSDSSGDSDDSEDEEERD
AIEKAKESKMKSRELNTKSKRRKSVTSEDESDDDSEDEKTKKKSNSKGSNKGLAGIDLSA
SAKAGRKERVTSAEEIREEKNELPGIRAKGKLLNDLPEVTVQSSSKGHKKLPEKNPIRDN
DSSNSSDDSDKEDSESKLTETKSKQAASRKRTASVSGLKKSKRVSSDSDDEQVSKKKRKK
AKKTSKRNSDDDSSSDSEAEASSKKKKHKKHKKHSKKSKKHKKHKRKNKKADSSSSSDEE
EEIRERVGKATSASLLLGGVNEDLEKQLRERALKSMKKNE
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcacgggcactactcagcagcaggacactcgcttcagcgacaaagagaaaaaa
ttaatgaagcaaatgaaattcggcgattgcctaaataagcgtgtggatatgtctaaggtg
aaattggatgtattgcgtccatggatcagcaaaaaaatcacggatattttacacattgaa
gacgatgtcgtcgtcgaatttgtctacaaccaattggaggaagaaaagttcccgtgtcca
aaaaaaatgcaaattaatatgactggctttttaaatgggaaaaatgcgcgacagtttatg
ggtgaattatggtcattgttactgtcagctcaagaaagtgaaagtggaataccagccgag
tttattcagcaaaagaaagacgagatacttaagagagaagagcaacaacgtcaaaatgat
cgctcccgttcacgcgatagggatagagaaagagatcgtgatagggatagggataatgaa
cgtgatcgagatcgtgacagtcggcgcagtggtagagatcgttccaatgatggccaacgt
gatgatatgatgagtcaacgtgagcagcagttgccgccaagcacattacaagcgatcgag
caggttaggtcacaattatcagctaaatctagatcgaattcggctgaagaaactaattta
ggtaacatttcccaaagcaagcatattgaggggggtagtgcagctagtgcgagtgctgcg
gcagcagcagcagctgcagctatactacgcgatcgttccaggtcaccaaatgctaactct
agaacagcagctgcagaagcggcagcatcgaaaatacgtaatcgatcaccgcgtaaacgc
tccagagagagatcaacaacacgaaaatcttcacatgaacgtaactcttcgccgcaacga
cgtcgaaattcaccgagagatagacgtcgatcctcacgatcaccaaggcgaagatcacct
ggcggagaccgacgtcgtcgacgtagtactcgtagtcgtaccagagatcgtagtgtaaga
cgagctgcaagtaagaaacgtcagatatcacgctcactttcacctcaaaaacgtcaaagt
ccaaaaccaagaggtcgccgttccaaagacagacggtcaagatcaagatcacgttcacgt
tcaaagtcgccagcaaagcgcaagccatcaccagcgccaaaccgaaattcaaaaacagca
aattcgtcaccctatcgtaagcgttcagcttcacgacactccaatccaaatacaccagtt
aatggacatgaagacgggggtaatgctaaaaagcgtgatggaagaaaacgttcgccgtct
ccaaatcctagtgaaagctcccgtgcatcacctgcagaaattagagcagcagctcgtata
caatccaaaggccgttctcgttcaagatctgcaagcaaaagatcggtaaggggcgctgct
tcttcacggtcacgttcaaggtcatcatcacgatcatccagagcatcagtacgctcaaat
aaaaaagttataagacgttcaagctctcgaaatacgagtctttccccgtcacctgaacgt
aaagaggattttgaaatacgccgtaataagaatagtgtacaaaagaagcgacattatcga
cacaatcgtgattcttctgcaagttccatcgacagagatcgcgatcgtgaacgagacggt
ggccgtagaatgatgggtgataacaggggtaggcgaggagacatgcctggcagacgattc
tcgccacacaatcgtagtccgcgtattgatggaggcggtggtcgcaatcaacgctcacga
tctcggcgtcgttcaaaatctcgtaaccgttccaggtcccgcaatcgatctcgttcacca
atgcgacgctcccgttctccgcgacgtttcaatcgccgtcgttcgccgatgatgcatttc
cgcggacgaggtggtggaaataatcgcggtcgcatgaacttctggcgtcgcagtcctagc
tggaatcgtggcggcggaggcggtggtggaggcggacgctttgaccgacgtttctcacct
caacgcagattctcgcgtgagcgcgatcgtcgcatgtctccaatgcaaaaccaatttcgt
aaattttcacctcaaaggcgattctcgccaccacaaaatatgcagtaccaaagacggtcc
agagaacggcgatttagcccgggtccacgagatcgtcgaccatcctcgccgatacgtgac
aactctcgtgatcgcggtggtggcggtaacaatttcaatcggtgggatcaaaacaatcgt
aatgttccaaagcccaaatctagatcttcaagttcgaattgggaattggacgatgaacag
gctccccaaggagttgcacgcaagtccagcgtagctaaagaaactagtccaattaaaaac
aacggtgaccgttcacgcagtgttcgacgctcacgagatagaagcgatcgtgattctagc
cagtcgtctgaaaaaattccaaaagctcgtgaaagttcgggacgtcgttcatctgttgaa
tatacaggtccttcggtgaaaactattgacctatccaaagaggaacgtagtgaatatcgc
aaatctaaggcagaatctgctcaaagagaatcaatccaagtcaaaaaacaggcaccccca
gcagttgcccccactgctgctctaaccatacgcaatgagaaattacgtgctaggtacagc
tcgagtttgtctcgcacaccgtcaccgtttttgaagcctcacgagcgcgaaaaactgcag
gcgaactctggaaagaagccgcaagagaagaaacctcaaaaaagccataaagaaagttat
tcatcctcttcggatagttctggcgacagtgatgacagtgaagatgaggaagaacgtgat
gcgatagaaaaggctaaagagtcgaagatgaagagtagagaattaaatacaaaatcgaag
aggcgcaagtctgtaacaagtgaagacgaatccgatgatgatagtgaggatgaaaaaacc
aagaaaaagtcgaattcaaaaggttcgaacaagggtctggcaggcatagatctatctgca
agtgccaaggcagggcgtaaagaaagagtcacatccgctgaagagattcgagaagagaaa
aatgaactaccaggtattcgcgcaaaaggcaaactacttaatgatttaccagaagtaacg
gttcaaagtagctcgaagggacataagaaattacctgagaaaaatccaataagagacaat
gattcttccaattcaagcgatgattcggacaaagaagattcagaaagtaaattaactgaa
actaaatcgaaacaagcagcttcccgcaagcgaacagcgtctgtttcaggtttgaaaaag
tcaaaacgcgtatcctcagactccgatgatgaacaagtttcaaagaagaaacgtaagaag
gcaaagaaaacatccaaacgaaactcagatgatgatagctcttcggattctgaggctgag
gcatcatcgaagaagaaaaagcataagaagcataaaaaacacagcaagaagagtaagaaa
cacaaaaaacacaagaggaagaacaaaaaagctgacagctcctcaagcagcgacgaagaa
gaagaaattcgggaacgcgtcggcaaggccacatcagcgtccttactgctcggtggagtt
aacgaggatttagagaaacagttgcgtgaaagggctttgaaatcgatgaagaagaatgag
taa
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