Ceratitis capitata (Mediterranean fruit fly): 101449867
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Entry
101449867 CDS
T07533
Name
(RefSeq) collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccat04147
]
101449867
00535 Proteoglycans [BR:
ccat00535
]
101449867
00536 Glycosaminoglycan binding proteins [BR:
ccat00536
]
101449867
Exosome [BR:
ccat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101449867
Proteoglycans [BR:
ccat00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
101449867
Glycosaminoglycan binding proteins [BR:
ccat00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101449867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Motif
Other DBs
NCBI-GeneID:
101449867
NCBI-ProteinID:
XP_023159497
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MDMDPTNRCNMRKKCGQSHSVCKRVVCDSIGWKMLTILVGLLCFGLFPTVFSLDGLQGQS
IKDAFGEYSLTDMISAQSQGIEYEEAEDGFPSYKFLPTSDVKTSYRVLLPEKLYEFAILT
TFMPNSPKGGYLFSVVNPMDTVVQLGLHLSPVNKNMYNISLLYTQSDQNTVSRKLVSYQL
PYLGKEWTTLSFQVLSDKVLFYYDCVLNETTPVVREPLELVFDSASTLYLAQAGLLLTGH
FEGNLQQMYVYTNPDAIITMCQPPAKKTEDIDNEILDDEGGSGLVPNDADYDLSDDSFWN
ATDETSGFPSQTPTSYLHERPYRTTKGEKGERGPKGPPGDSIRGPPGPPGPPGPKGESAT
FPPFVDFPTGPDAKYTGKCTCNASDILEAIKDNEILRETIRGPPGLPGKEGKTGAPGLTH
PVERSLMQYVKRKTGATGKPGERGAPGPKGDRGDRGDPGSRGPEGLQGQKGEPGVDGMPG
VQGVPGPPGPPGLPETYDESLMGNSMRAMRSSSPGPKGPPGDKGDTGATGERGQQGQKGE
RGDPGMTGEKGDRGHPGIHGSTGLKGEPGQPGVPGMAGAPCAPGLKGDRGLPGELGPIGP
PGPPGEVIYTDNSLNGTSAAAGLGQCQCPAGPPGAPGMRGPQGYEGPPGLNGEPGPAGSN
GLTGLPGSKGEKGEKGVRGLSGPKGDRGPEGPPGQAFFAGGYEGMAMNGTKGEKGEKGMR
GRRGKPGQAGPIGPPGKPGPMGDIGHSGRPGLQGPKGDSGTKGQKGEAGGREGLKGDKGD
RGQDGRDGLPGPPGLPVAAGEGVQYIPMPGAPGPPGPPGQPGMPGLSINGPKGEPGMDSR
SFYGDPSYYGRPASGRSSLDEIKALRELQDLRDRPDSTSGPPGPPGPPGPPSHSRHEDEE
TPYFSASSWNMRIVPGAVTFPNIDEMTKKSAMNPPGTLAYITEEEALLVRVNKGWQYIAL
GTLVPIATPAPPTTVAPPVRVDIQSSNLLNNLPPLLNTPTFTTAPEYETWYPRMLRVAAL
NEPYVGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDSIVRVADRDLPVVNTRG
DVLFNSWKGIFNGQGGFFSQAPRIYSFSGKNVLTEPLWPQKHVWHGSLPNGERSIDTYCD
AWHSSSIDKFGYASNLLGNKLLDQERQTCDSKLIVLCVEALSQDRRRKRDLSDSAPEFHT
AEAYARYLENVLT
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggacatggatccaacaaatcgctgcaacatgcgcaaaaaatgtggccaaagccatagt
gtgtgcaagcgagtggtgtgcgacagtattggttggaaaatgttgaccatacttgtggga
ctcctctgctttggtttatttccgacagttttttctcttgatggacttcagggacaatcg
ataaaggatgcttttggtgaatactcactcacggacatgatcagcgctcaatcgcaaggc
atcgaatatgaggaggccgaggatggttttccttcgtataaatttttgcccacttccgat
gttaaaacctcatatcgcgtcttactacccgagaagctgtatgaattcgcaatactcacc
acatttatgccgaacagccctaagggtggctatctcttcagtgtggtcaatccaatggat
actgtcgtgcagttgggtctacatttatcgcccgttaataagaatatgtataatatttca
ttgctctacacacaatcggatcaaaataccgttagccgcaaattggtcagctatcagttg
ccgtatctaggcaaggagtggacaacactttcatttcaggtactcagcgataaggtgctc
ttctactacgactgcgtgctgaacgagactacgccagtggttagggaaccgctggagttg
gtctttgattcagcgtcgactttatatttggcacaagcaggtctcttattaactggacac
tttgagggaaatttacaacaaatgtatgtttatacaaatccagatgctataattacaatg
tgccagccgccagcaaagaagacggaggatatcgacaatgaaatattagacgatgaaggc
ggctcaggccttgtgccgaatgacgcggactatgacctttcagatgacagtttttggaac
gcgacggacgaaaccagtggatttccatcacaaacaccaacttcatatttgcacgaaaga
ccatatcgtacaacaaaaggtgaaaaaggtgaacgcggaccaaaaggaccacccggtgat
agtatacgtggtccaccgggaccaccaggcccaccggggccgaaaggtgaatcggctaca
tttccgccattcgtggattttcccaccggtcccgatgcgaaatacactggtaaatgtaca
tgcaacgcgtctgatatcctagaagcaatcaaagataatgaaatattacgtgaaacaata
cgcggaccacccggtttgccgggtaaggagggaaagactggtgcgcctggactcacgcat
cctgtggagcgaagtctcatgcaatatgttaaacgaaaaacgggtgctacagggaaacca
ggtgaacgcggtgcccccggcccgaaaggtgaccgcggcgataggggtgatcctggctcc
cgtggacccgagggtctgcaaggccaaaaaggtgagcctggcgtcgacggtatgcccggc
gtacagggcgtacctggaccgccgggaccgccaggtttgcccgaaacttatgatgaatcc
ttaatgggcaattcgatgcgtgcgatgcgcagctcgtctccaggacccaagggtccacct
ggcgataaaggtgatactggcgcgacaggcgaacgcggtcagcagggtcagaaaggtgaa
cgtggtgatccgggaatgacgggcgagaaaggtgataggggacatccaggcatacatggc
tcgacgggcttaaaaggtgaacccggtcaaccgggcgtaccgggcatggcaggtgcacct
tgtgcgccaggccttaaaggagatcgtggtcttcccggcgagttgggacccatcgggcca
cccggtccacctggtgaagttatttatactgataattcgttgaatggcacatcagcagcg
gcgggcttggggcaatgccaatgtccagccggtccacccggtgcaccgggtatgcgcggc
ccacaaggctatgagggaccacccggtttgaacggcgagcctggtccagctgggtcgaac
ggtttgaccggcctgcctggctccaaaggtgagaagggcgaaaaaggtgtgcggggcctg
agcggcccgaaaggcgatcgtggaccggaaggaccgccagggcaggcctttttcgctggc
ggctacgaaggcatggctatgaatggtaccaagggtgagaagggcgagaagggtatgcgc
ggacgacgcggcaaaccgggccaagctggaccgatcggaccgccgggcaaaccaggtcca
atgggtgatattgggcattcgggacgtcctggactacaaggcccgaaaggtgattcagga
acgaaaggacaaaagggagaagctggcggacgggaggggttgaaaggcgacaaaggtgat
cgtggccaagatggacgtgatggcctacccggaccgcctggtctaccagtagcagcgggc
gaaggtgtacagtatataccgatgccaggagcacctggaccaccgggtccacccggccaa
ccaggcatgcccggtttgtcgataaacgggccgaaaggtgagcccggcatggattcgcgc
agtttctatggtgatccgtcttattatggacgaccggcaagtggacgctcctctctcgac
gaaatcaaagctttacgtgaactacaagacttgagagaccgtccagacagcacatctgga
ccacccggcccgccaggtccccccggcccacccagtcattcgcgtcatgaggatgaggag
acaccttatttctcagcatcttcctggaatatgcgtatcgtaccaggtgcggtgacattt
ccgaacatcgatgaaatgacaaagaaatcagcaatgaatccaccaggcacattggcctac
atcaccgaagaagaggcgctcctggtgcgcgtcaacaagggctggcaatatatagcgctt
ggcactttagtgcccattgccacgcccgccccaccgaccacagtcgcaccgccagtacgc
gtagatatacaatcatcgaatctgctcaataatctgccgccactactgaacacgccaacg
tttacaacagcgccagagtatgaaacgtggtatccacgcatgcttcgcgttgctgcactc
aacgagccatatgttggcgatctgcaaggcatacgtggcgcagacttcgcctgctatcgc
caagggcgtagagcgggtttgttgggcaccttcaaagccttcctgtcatccagagtgcaa
aatcttgactccattgtacgtgtcgccgaccgcgatctaccggtagttaataccagaggc
gacgtactcttcaactcatggaagggcatctttaatggccaaggtggcttcttctcgcaa
gcgccgcgtatatatagttttagcggtaaaaatgtgctaacggagccattgtggccacaa
aagcacgtttggcatggttcactaccgaacggtgagcgttcgattgacacatattgtgat
gcttggcattcgagttccatagataaatttggttatgcaagcaatttgctagggaacaaa
ctgctcgaccaggagcgacaaacatgcgatagcaaattaattgtgctctgcgtggaggcg
ttatcacaggatagaaggcgaaaacgcgatctcagcgacagcgcacccgagttccacacg
gcggaagcctacgcgcgttatctggaaaatgtgttaacttga
DBGET
integrated database retrieval system
