Ceratitis capitata (Mediterranean fruit fly): 101449978
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Entry
101449978 CDS
T07533
Name
(RefSeq) protein suppressor of forked isoform X2
KO
K14408
cleavage stimulation factor subunit 3
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101449978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101449978
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
101449978
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
PRP6_TPR
Elongin_A
Motif
Other DBs
NCBI-GeneID:
101449978
NCBI-ProteinID:
XP_004520405
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MSVRDQIKIDIEWGHERLVRSQQVVEMRPYDIESWSVLLREAQTRPVNDVRSLYESLVNV
FPTTARYWKIYIEQEMKGRNFERVEKLFQRSLVKILNIDLWKLYLTYVKETKAGLSTHKE
KLAQAYDFALEKIGMDLHSFSIWQDYIHFLRSVEAVGSYAENQKITAVRRVYQKAVITPI
VGIEQLWKDYIAFEHNINPIISEKMSLERSKDYMNARRVAKELEILTKGLNRNLPAVPPT
LSKEEMKQVDLWKKFIAFEKSNPLRTEDTALITRRVMFATEQCLLVLTHHPAVWHQAAQY
LDQSAQALAEKGVRILLHKHINVFLKFHSCHKRSFVLSLQSLVWSFKWRKDTQAAKIFGD
ECANILERSINGVLNKNALLYFAYADFEEGRMKYDKVHAMYNKLLSIPDIDPTLAYVQYM
KFARRAEGIKSARAVFKKAREDVRSRYHVFVAAALMEYYCSKDKDIAFRIFELGLKRFGG
SPEYVMCYIDYLSHLNEDNNTRVLFERVLSSGGLTPTLSVDVWNRFLEFESNIGDLSSIV
KVERRRSAVLENLKEYEGKETAQLVDRYKFLDLYPCTSVELRSIGYTENVGIMTNKNALA
ANANAKPDEPDVEQVITLPRPDFSQMVPYKPKVNAHPGEHPLAGGTFPQPPALASLCAQL
PPPVSFRGPFVSIEMLFDIFNRIKLPDAVPLPVGDHGCDTKLFDLAKSVHWIVDDSICTG
DAGSLKRRRMLPGGDDSDEETQTPAPPANDIYRLRQQKRFSK
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgcgggatcaaattaaaatagatatagaatggggacacgaacgtttggtacgt
tcacaacaggtggtagagatgcggccctacgacatcgaatcttggtctgtattgctgagg
gaagcacaaacgcggccagtaaatgacgtgcgcagcttatacgagtcgcttgtgaatgta
ttcccaacaacagcacgttattggaagatttacatagaacaagagatgaagggtagaaat
tttgaacgtgtggaaaaattatttcaacgttcattggtgaaaatcttaaatatagatttg
tggaaattatatttgacatatgttaaggagaccaaagctggcttgagtactcacaaagaa
aagcttgcacaggcttatgattttgctttagaaaaaatcggcatggacttgcattcattt
tcaatatggcaagactacatacattttctacgtagtgtggaggctgtaggcagttatgct
gaaaatcagaaaattactgccgttcgacgagtatatcaaaaagcagtgatcacacctatt
gtgggcatagagcagttgtggaaagactatattgcattcgagcataatattaatcccatt
atatcggaaaagatgagcttagagcgttcgaaggactatatgaatgctcgacgcgttgct
aaagagttggaaattctaaccaaaggtttaaatcgtaatttacccgcagtgccgccaaca
ctatccaaagaagaaatgaagcaggttgatttatggaaaaaatttattgcttttgaaaag
tccaatccgctacgtacggaggacaccgcactcataacacgtcgcgttatgtttgctaca
gagcagtgtttgctggtgctcacacatcatccagccgtttggcatcaggcagcacagtat
cttgatcaaagcgctcaagcattggcagaaaaaggcgtgcgtattttgttgcataagcat
ataaatgtatttttaaaatttcacagctgccacaaaaggagttttgtgttgtcgctacag
tctttggtgtggtcttttaaatggagaaaggatacacaagcggcgaaaatttttggcgat
gaatgtgctaatatattggagcgttccattaatggcgtattgaataaaaacgctctactg
tactttgcttacgctgacttcgaggaaggacgtatgaaatatgataaagttcatgctatg
tacaataaactgttgtccataccggacattgatccaacgttggcctatgtgcaatatatg
aagtttgcgcgtcgcgctgaaggcatcaaatcggcgcgtgccgtcttcaaaaaagcgcgt
gaggatgtgcgctcacgttatcatgtctttgttgctgcagcgttgatggaatactactgt
tcgaaggataaggatattgcctttcgtattttcgaactgggcttgaaacgttttggcggc
agtccggagtatgtcatgtgctacattgattatttatcacatttaaatgaggataacaat
acgcgtgtgctattcgagcgcgtgctctcctcaggtggcttaacgccgacgctgagtgtt
gatgtgtggaatcgatttttggaattcgagtcgaatataggcgacttatcaagtattgtg
aaagtggaacggcgtcgtagcgcggtgttggagaatttgaaagagtatgagggcaaagag
actgcacaattggtggaccgttacaaatttttggacctatatccatgcacaagtgtggaa
ctgcgttccattggttatacagagaatgttggcattatgacgaataaaaacgcgctcgcc
gccaacgccaacgctaagcccgatgagccggatgtggagcaagtgatcacactaccgcgg
ccggacttctcacaaatggtgccctacaaaccgaaagtcaatgcgcatcccggtgaacat
ccgctagcaggcggcacatttccacaaccacccgcattggcatcactctgtgcacagctg
ccgccgccggtgtccttccgtggtccattcgtctccattgaaatgctattcgatattttt
aatcgcattaagttgcccgacgccgtaccactaccagttggtgaccatggctgcgacacg
aagctcttcgatttggccaaatccgtgcattggattgtcgatgacagcatttgcactggc
gatgcgggcagtctgaagcggcggcgcatgctgcccggcggcgatgatagtgacgaggag
acacaaacaccggcgccgcccgccaatgacatttatcgtttgcgtcagcagaagcgtttc
tccaaatag
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