Ceratitis capitata (Mediterranean fruit fly): 101450574
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Entry
101450574 CDS
T07533
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101450574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101450574
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
101450574
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
PIN_4
Rrp44_S1
CSD2
Dis3l2_C_term
DUF6005
Motif
Other DBs
NCBI-GeneID:
101450574
NCBI-ProteinID:
XP_004518039
UniProt:
W8BRE5
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MQTIREFTRKTKRGNILKIVREHYLRDDLGCGAQICENCVQDETTVSLLPEREIKSTLFP
FPHYIVLDTNVVLNQIDVLEEDAIVNVIVLSTVLSEVKHNSSAVYKRFREIVQHKPRGFY
VFVNEHHKDTYVEREPGESANDRNDRAIRKATLWYDHHIREADNNRAFKKAGRPLTKVIM
ITDDAENRSRAEKDGILVASAEEYVKSLTDFPMLIDKYARKSFESEKKSLPIFPTHLSVN
EIHDGIKAKKLLQGSFQASRENYLEGAVSVEGYEHPVLIQGREALNRAVDADIVAIELLP
KEEWTAPSEIVLEEGVDEDPGDNVERTDKEKAVFDKKLAKSEEIRPTGKVVGIIRRKWRQ
YCGILLPSQLENTSRHIFVPADRKIPRIRIETRQADQLQNKRIIVAIDSWPRTSRYPHGH
FVRSLGPLGDMNTENEVILLEHDVPHSKFSEEVLSFLPKMPWIITPEDYEKRVDLRDLYI
CSVDPPGCTDIDDALHCRELPNGRLEVGVHIADVSHFIRPGNALDKEAAARGTTVYLVGK
RIDMVPELLSSNLCSLVGGEERFAFSCVWELDNEANILAKRFHKSVIKSKAAMTYEQAQI
IIDDATQQTEIAISLRHLNRLAKILKKRRMDNGALVLASPEIRFQVDSETHEPLEVEAKQ
VRETNSMVEEFMLLANCTVAEHICAEFPECAMLRRHPRPAPSNFEPLIKAAGYQGFEIKI
ETGLELASSLDACVKPDNAYFNTMIRILTTRCMMQAVYFISGTLQPEEFFHYGLATPIYT
HFTSPIRRYSDIIVHRLLAASIGADSTYADLLDKKLNEELCHNLNYRHKMAQYAGRASVA
LNTHLFFRGKTQDEEGYVLFVRKNALQVLIPKFGLEGTVYLNSLSGDKKPTPGDVVFKFN
EEDYTQRCGDVVFHAFDPVTVRLSLDSRNVQHEKLVFRLVKPYIKGFSVELTEQNDNVEM
LDISTANAAEEAPPQKKSKKSQKKKK
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgcagacaatacgcgaattcacgagaaaaacgaaacgtggtaatattttaaagatcgta
cgtgaacactatttacgtgatgatttgggttgtggggcacagatatgtgaaaattgtgtg
caggatgagacaactgtgtctctactgccggaacgggagataaaaagtacattattccct
tttccgcactatatagtgttggatacaaatgttgtgcttaatcagattgatgtcttggag
gaggatgctatcgtcaatgtgattgtgctatccaccgtattgagtgaagtgaaacataat
agtagtgctgtttataagcgttttcgtgaaatagtgcagcataagcctcgaggtttctac
gtatttgtcaacgaacatcacaaggacacatatgttgagcgagaacctggggaaagtgct
aacgatcgcaatgatcgtgctatacggaaagctacactatggtatgaccaccatattcga
gaagctgataataatcgtgcattcaaaaaggctggacggccgcttactaaagttattatg
atcactgatgatgcggaaaatagatcacgcgcagagaaagatggcatattggtggcaagt
gcagaagagtatgtaaaatctctaacagattttccaatgctaattgataagtatgcgcgt
aagagttttgaaagcgaaaagaaatcattgcctatattcccaacacatttgagtgttaac
gagatacatgatggcattaaagcaaagaagctcctgcagggttcttttcaagcgtcgcgt
gaaaattacttagagggcgcagtatctgtcgaaggatatgaacatccggtgctgattcaa
ggacgtgaagcactgaatcgtgccgtagacgctgatattgtagcaattgaactgttgccg
aaagaagagtggacggcaccaagtgaaattgttttagaagaaggtgtcgacgaagatccc
ggtgacaatgtggaacgcactgacaaagaaaaagcggttttcgataagaagctcgcgaaa
tccgaagaaatacgtccaacaggaaaagtggttggcattatacgccgcaaatggcgacaa
tattgtggcatattgctgccaagtcagttggagaacacatcacgtcatatattcgtaccg
gccgatcgaaaaattccacgcatacgaatagaaacaagacaagccgatcaattgcagaat
aaacgtataattgtggctatagattcttggccacgtacttcacgatatccacatggccac
tttgtgcgcagtcttggtccacttggcgatatgaataccgaaaacgaggtgattcttcta
gagcacgacgtgccacatagcaagttctctgaagaagttctcagttttctgccaaaaatg
ccttggatcattacaccagaggattacgaaaaacgcgttgacttacgtgacttatatata
tgctctgtggaccccccaggttgtacagatattgatgatgcacttcattgtcgcgaacta
cctaacggtcgtttggaagtgggtgtacatatcgctgatgtgagtcacttcattcgccct
ggcaatgcattggacaaggaagcagctgcacgtggtacgaccgtgtatttggtaggcaaa
cgtatcgacatggtaccggaactcttaagttccaatttgtgttcgctggtaggcggggaa
gaacgatttgcgttttcttgtgtttgggaactagacaacgaggcgaatatattagcaaaa
cgcttccacaagagtgtaataaaatcgaaagctgcaatgacatacgaacaggcacaaatt
attatcgacgacgctacacagcaaacggaaatagccatatcgttgagacatctcaatagg
ctggcgaaaatattgaagaaaagacgtatggataatggcgcgctggtattggcttcaccg
gagatacgcttccaggtggatagtgaaacgcatgaaccgctcgaagtagaagcgaaacaa
gtacgtgaaactaattcgatggttgaagaattcatgttgttggcaaattgtactgtggcc
gagcatatttgcgctgaatttccagaatgtgcaatgttacgacgacatccacgtccagcg
cccagcaacttcgaaccactcattaaagctgcaggttatcaaggtttcgaaataaaaatc
gaaacgggcttagagctggccagttcattggatgcttgcgtcaaaccagataatgcatat
ttcaacacgatgatacgaatactcactacacgttgtatgatgcaagcggtatactttatc
agcggtacattacagccggaggaatttttccattatggcttggcgacccctatttacacg
catttcacatcgccaattcgaagatactcggacatcattgttcatcgcctcttagctgcc
tcaattggtgctgatagcacgtacgccgatttgcttgataagaaactaaacgaagagcta
tgtcataatctaaattatcgtcacaagatggcccaatatgctggacgcgcatccgtggca
ctaaatacgcatttgttcttccgcggtaaaactcaggacgaggaaggttacgtattattc
gtacgtaaaaatgcgctacaagtgcttataccgaaattcggtttggaaggtactgtgtac
ctaaattccttatcaggtgataaaaagccaacaccaggagatgtagtattcaagtttaat
gaagaggactacacacaacgttgcggagatgtcgtttttcatgcattcgatccggtaacg
gttcggttgagtttagactcgcgtaatgttcaacatgaaaagctagtgtttcgattggta
aaaccatatattaaaggctttagtgtggaattaacggagcagaatgataatgtggaaatg
ttagacatttcaacggcaaatgcagcagaggaagcaccaccacaaaagaaaagcaaaaag
tcgcaaaagaaaaagaaatag
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