Ceratitis capitata (Mediterranean fruit fly): 101452078
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Entry
101452078 CDS
T07533
Name
(RefSeq) RNA-binding protein 39 isoform X2
KO
K13091
RNA-binding protein 23/39
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccat03041
]
101452078
Spliceosome [BR:
ccat03041
]
Common components
Common spliceosomal components
General mRNP proteins
101452078
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
Nup35_RRM_2
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
101452078
NCBI-ProteinID:
XP_004533936
UniProt:
A0A811UD83
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MAEDFDVEAMLEAPYMKNNVSRGDRDSSSSRKSPCREYEESGSGKGGSKSSSSAHLNGRK
QYSRSRSGSPHASTDERKLHKSKDSERTRDRDESRYSRDRDRPRDKDRTRDRDRDRDRNG
ERERRYGSQDRERERERDRDREPEKRRSRSKDRRRSSRSRDRDRHSRERRGSRPQSERRR
SRSPIRDRRSRDKKLSPIREFKGGRPGYGSREKSRRRSNSPRPFRRGRTPPNGLGDRSPR
ADLSPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFK
DPESVALALGLSGQKLLGIPISVQHTQAEKNRIANAVPTFTPKNHTGPMRLYVGSLHFNI
TEDMLRGIFEPFGKIDSIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRPM
KVGNVTERLDMNTSSLDTDEMDRSGIDLGATGRLQLMFKLAEGAGLAVPQAAANALLATA
PQPAPIQTQAQTPAIATQCFMLSNMFDPRSETTPSFDSEIRDDVIDECSKHGGVLHIFVD
KASPTGNVYLKCPSITTAVLAVNALHGRWFAGRVITAAYVPLLNYHSLFPDAITAVNLMA
SKRKSGE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagattttgatgtagaagcaatgctggaggcgccgtacatgaaaaataatgtc
agccggggagatcgtgattccagcagcagccgaaaatcaccatgcagggaatatgaggag
agcggtagcggcaagggtggaagcaaatcatcatcatctgctcacttgaatggtcgaaaa
caatactctcgaagtcgttctggttcaccacatgcttctacagacgaacgcaagttgcat
aaatcgaaggatagtgaacgtactcgtgatagagacgaaagccgttattcaagagataga
gatcgtccacgcgacaaagatcgcacacgtgaccgtgatcgcgatcgagatcgtaacggt
gaacgtgagcgacgttatggttcacaagatcgtgaacgggaacgggaacgtgatcgtgat
cgggaacctgagaagcgccgaagccgctctaaggacagacgtcgcagcagtagatcacgg
gatcgtgatcgacattccagagaaaggcgtggtagtagaccacaatcggaacgacgacgt
agtcgctcgcctatacgtgatcgtcgctctagagataaaaaactgagtcccatacgtgaa
ttcaaaggaggtcgtccaggttatggctcaagggaaaaaagcaggcgtcgcagtaattca
ccccgacctttccgacgcggccgaactccacccaatggtcttggcgatcgttcgcctcgt
gctgatcttagtccagaggaacgtgatgcacgtaccgtattttgtatgcaactatcacaa
cgcatacgcgcacgcgacttggaagagtttttctccagtgttggcaaagtacgagatgtt
cgcctaatcacctgcaataaaacaaaacgatttaagggtatagcatacattgaattcaaa
gatccagaatccgttgcacttgcactgggtttgtctggtcaaaaattattgggcattcca
atttctgtacaacatacacaggctgagaaaaatcgtattgcaaatgctgtacccactttc
acacctaaaaatcacacaggaccaatgcgtttgtatgtaggttcgctgcattttaatata
actgaggatatgcttcgaggtatttttgaaccatttggaaaaatagattcaattcagttg
attatggatactgaaactggtcgttctaagggatacggatttattacgtaccacaacgcg
gatgatgccaagaaggctttggagcaattaaatggttttgaattggctggtcggcccatg
aaagtcggaaatgtgactgaacgtttagatatgaatacatcttctttggataccgatgaa
atggatcgaagtggtatagatttgggtgcaacgggcagattacaattaatgttcaaacta
gcagaaggcgctggcttagcagtaccacaagctgcggcaaatgcgttattagccactgca
ccacagccagcacccattcaaacacaggcgcaaactccggcaatagctacgcaatgtttt
atgttgtccaacatgttcgatccccgttcagaaacaactccttcattcgatagtgaaata
cgagatgatgtcattgatgaatgttccaaacatggtggtgtactacatatatttgttgac
aaagcatcaccaacaggcaatgtttatttgaaatgtccaagcataacaaccgccgtgctc
gcagttaatgcgttacatggacgatggtttgctggtcgtgtaattaccgcagcctatgta
cccttactaaattatcactctttatttcccgatgcgataacagcagttaatttaatggcg
tctaaacggaagtcaggagaataa
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