Ceratitis capitata (Mediterranean fruit fly): 101452339
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Entry
101452339 CDS
T07533
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101452339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccat03021
]
101452339
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101452339
Transcription machinery [BR:
ccat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101452339
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
101452339
U7-dependent histone pre-mRNA processing factors
101452339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Cnd1
Motif
Other DBs
NCBI-GeneID:
101452339
NCBI-ProteinID:
XP_004519512
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MDGLLGRSQFLGEAVNLFTDEKTANARSKVVEWLNDVPNAEASTKCDLLVKVQEMILGSC
VELLEEFLEHILSLAHDANADVRKQVVCFIEQICKVKVELLPQVISIVSMLLRDRSPQVI
KRVIQACGSVYKKGLQWICAIDEMSDSAEQAWSVLSLVKAQILDLIDNENDGIRTNAIKF
LEGIVVLQSYPDEDSQKKDNDFSLQDIPLNSKLVKRKKLEEEALNIFDILLKFHAATHIS
SVNLITCTGSLCTIAKLRPSLMGPVVDAFKQLNSNLPPTLTDSQASSVRKSLKMQLVALL
KNRGSYEYQATIRHMLSDLGASQGEIQRAIPKMDKQEQTRRQKRILESAASNIHKKMRLD
SINRQQERRAKSGADNENTKEVEMEVDEEEVEKQRQRCLRVNEKFLAEHLRTTDMAVNLV
VEFLPKLPGEVPDHFLNEYAPIKDMSIQQQVGKIAKLLGEQMTAQKIGPGSAAFSKEIPM
RPRPLEPMDTTESEQPVDEDQLRKDEATKKLRENMERVKGEQELIERMKMRAKTLKLQEV
TKPFSRSVKEKFLLESVKRITQSERQCIVGGVSAKRRKILTVMAATFPDKVRYFIFDFIM
LDVRQRIDLAFTWLYEEYCLLQGFTRHSYVKSENRPDHAYNELLSQLIKGVRETCDLKDK
IHLMRRILLEAPLLPDEALNQLVEMCFSEEFVNPGVDLLKDLTILRPPRKNKLIKVLLLF
CVHERTDLRERALEHIISLYHVNKVLPNRIEEFALEWATHLEKEVPPPSIFAEEFGRPEA
EVQWKEETAKTCLTLLLTLLPYKPKVFLEKLCKIYTTTAADLKRTVLRSIDPAIKKMGVE
DIALLKLIEDCPKGCETLIIRVVHLLTERVATPNVELVHRVRELYANKVNDVRVLIPVLS
GLTRQEVLNALPRLLKLNQIVVKEVFNRLLGIGADFANQTMAASPTDILVALHTMDPNTC
DLKAIVKATSICLTEKDVFTPDVLIGVLQQLVEVVPIPTLLMRTIIQSITLYPRLTNFVL
NLLQRLILKQVWRQKVIWEGFLKCCQRLKPQSLPVLLHLPQQQLVSALEQCPDLRQPLFE
YAQSIQEEPMSGITPQLLDVISGKTVDLFIADESGGYITVDQIKKEVEDPTEIGVISTIP
IASVPAPVPALIPTLGTVSTPQPTSSQPLPPGED
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggatggacttttaggacgcagccaatttctaggtgaggcagtaaatcttttcaccgat
gagaaaactgcaaatgctcgcagtaaagttgtagagtggctcaatgatgtacccaacgca
gaggcttcgactaagtgtgacttgctggttaaagttcaagaaatgattcttggttcttgt
gtggaactgctcgaagagttcctggagcatatactctcgttagcacatgatgcgaatgca
gatgtccgcaaacaagtggtttgttttatcgagcaaatttgcaaagttaaagtggagtta
ctcccacaagttataagcatcgtttctatgcttctacgtgatcgttcgcctcaagtaatt
aaacgtgttatacaagcatgtggtagtgtgtacaaaaaaggcttgcaatggatctgtgcc
atcgacgagatgtcggacagcgcagagcaagcatggagtgtacttagtttagtaaaagca
caaattttggatctaatagataatgaaaacgatgggattcgcacaaacgcgatcaagttc
ctggagggcattgttgtgttgcaaagttacccggatgaagatagtcaaaaaaaagacaac
gacttttctttgcaagatattccattaaattcaaagttggttaaacgaaaaaaattggaa
gaagaagctttaaatattttcgacatattgttaaaatttcatgccgctactcatatatca
tctgtgaatctcataacttgtactggaagcctgtgtaccattgcgaaattgcgtcctagt
cttatgggcccagtggtagatgctttcaagcaacttaattcaaatcttcctccaactctt
acagattcacaggccagctctgttagaaagagtttaaaaatgcaactagtggctttgtta
aagaatcgtggatcctacgaatatcaagccactattcgacatatgctgtcagatttggga
gcatcacaaggtgaaatccaacgcgctataccaaagatggataaacaggagcaaacacga
cgtcaaaaacgcatattggaaagcgcagctagtaatatacacaaaaaaatgcgtcttgat
tctataaacaggcaacaagaacgcagagccaaatctggcgctgataatgaaaatacaaaa
gaagtagagatggaagttgatgaagaagaggtggaaaaacaaaggcagcgttgtttacga
gtaaatgaaaaattcttagctgagcatttgcgtacaactgatatggcagtgaatctagtt
gtagaatttttacctaagttaccaggtgaagttccggatcatttcttaaatgaatatgcg
cccatcaaagatatgtccatacaacagcaggtgggaaagatagcaaaattgcttggcgaa
caaatgaccgcgcaaaaaataggaccaggctctgccgccttcagcaaagaaattcccatg
agaccacgaccactggaacccatggatacaactgaaagtgagcaaccggttgatgaagat
caattgagaaaagacgaagccactaaaaaattacgtgaaaacatggagagagtcaaaggc
gaacaagagctaattgaacgaatgaaaatgcgtgctaaaactctgaaattacaagaagta
accaaaccattttctcgctcagttaaggaaaaatttcttttagaatctgtgaagcgcatt
acacaatcagagcggcagtgtatagtgggtggcgtgtcggcaaagcgtcgtaaaatactt
accgttatggcagcaacattccctgataaagtgcgatatttcattttcgatttcattatg
cttgacgtgcgacagcgtattgatttggcgtttacatggttgtatgaggaatattgctta
ctacaaggcttcacacgacattcttacgttaaatctgaaaatcgtccagaccatgcttac
aatgaactattgagccagctgatcaaaggcgtgcgtgaaacttgtgatttaaaggataaa
attcatttaatgcggcgtattttactcgaagcaccattgctgcccgatgaagcacttaat
cagttggttgaaatgtgtttctctgaagaatttgtgaatccgggcgtggatctgttaaaa
gatttgaccatactgcgaccacctcgtaaaaataaattgataaaagtgcttctactcttt
tgcgtacatgaacgtacagatttacgagagcgtgcactggaacatattatatcactgtat
catgtaaacaaagtactaccgaatcggattgaagagtttgctttagaatgggcaacacat
ttggaaaaggaggtaccaccaccaagcattttcgcagaagaattcggccgacctgaggcc
gaagtacaatggaaggaagaaactgctaaaacatgcttgacattgctgcttacattatta
ccttacaagccaaaagtttttctggagaagctgtgcaaaatctacacaacgactgccgct
gatttgaaacgtactgttctacgctctatcgatccggctatcaagaaaatgggtgtagag
gacatagcattactgaagctcatcgaggattgtccaaaaggatgcgaaacgcttatcatt
cgtgttgtacatctattaacagagcgtgtagcgacccccaatgtggaacttgtacatcgt
gtacgagaactttatgccaacaaggtcaatgatgtgcgtgtactcatacctgtactcagc
ggtctcacacgccaagaggttctaaatgcgttgccgaggttgcttaaattaaatcaaatt
gtcgttaaagaagttttcaataggctacttggcattggtgctgatttcgctaatcagaca
atggcggcttcacctaccgatatacttgtcgccttacataccatggatccgaatacatgt
gatttaaaggctatagttaaagccacttccatctgtctgactgaaaaagatgtattcacc
ccggatgtgctaatcggtgtgttacaacagctggtggaagtagttccaatcccgacgctt
cttatgcgcaccattatccaaagcattacactttatccacgtttaacaaattttgtatta
aatcttctacaaagactcattttgaagcaagtatggcggcaaaaggtgatttgggaaggt
tttctcaaatgttgccaacgattgaagccacaatcattgcctgtcttgttacatttacca
caacagcaactcgtaagcgcattggaacaatgcccagatctgaggcaaccgttatttgaa
tacgcacaaagtattcaggaagaaccaatgagtggaatcacaccacaattgctagatgta
atatcaggaaaaaccgtagatttatttatagcggacgaaagtggaggctacattactgtt
gatcaaatcaaaaaagaggttgaagatcccaccgaaattggtgtaatatcaaccatacct
attgcatcagtaccggcaccagttcccgcccttattccaacacttgggactgtcagcaca
ccgcagcccacttcttctcaacccttaccaccaggcgaagattaa
DBGET
integrated database retrieval system
