Ceratitis capitata (Mediterranean fruit fly): 101453630
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Entry
101453630 CDS
T07533
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03013
Nucleocytoplasmic transport
ccat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101453630
03015 mRNA surveillance pathway
101453630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101453630
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101453630
mRNA cycle factors
P-body specific factors
101453630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
ECSCR
Motif
Other DBs
NCBI-GeneID:
101453630
NCBI-ProteinID:
XP_004526449
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MIKTENDVKVDIKSAKSEKERSNKRTHRKEKQKPQTKIVIRHLPPTMTEADFLKQIDPLP
PHDFYYFAAADWSLGFDATCRAYISMKNYDDVFLFRDRFDGYVFVDSKGAEYPAIVEFAP
FQGLKNKSRRVDSKVSTIEQESHYQNFITKLEEEREAAKSGECKLEFSLDRKKEEKITST
PLLQYLANKKEKRREDAKRRQEEKRRQRDEDKEKRKQVQVTKIISNNEGAAAGGGKSNKL
GVGKENVVGEKSGSQQLHEEGKSSRSQRRAERNQKRREEFERKRQEREKVLEVKSKVDAI
AGSERKTKEQSLQGCKADDGKQQQRKEGGKRYSERRERDRNRNRKEKEKEKPQSTGVDGI
QKSESTASEAMKAAAVAAAGGEAIVSESVMNFIRSVATAKEFVPKHKQQKMEELKNTSST
ESVAPAKVERDLDDKASEEEQKKENFFGEEDTRTQKQRNADEQRRIRNKDRPSIAIYQPK
ARLRISEERDPISSQPQGSVKSDTRSNPASDCESIKKEETRTKKVSRYSERRAERRNNKD
KQKSSSDSADLEPKVEAAQSFKLDDIPGTSEPLQDNEK
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaacggaaaacgatgttaaagtggacatcaagtctgcaaaatctgagaaagag
cgctcaaataagcgcacccataggaaagaaaagcagaagcctcaaactaagattgttatt
cgacacttgccaccaaccatgactgaggccgattttcttaaacaaatcgatcccctacca
ccacatgatttttactatttcgctgcagcggattggtccctaggattcgatgctacatgc
cgcgcgtatatatctatgaaaaactatgatgatgtattcctattcagggatcgtttcgat
ggttatgtttttgtggattccaaaggtgcagaatatccagccattgttgagtttgcacca
tttcaaggtctgaaaaataaatcacgtcgagttgacagtaaagtgagtaccatagagcag
gaatctcactatcaaaactttataaccaaactggaagaagaacgagaagctgctaaaagt
ggtgaatgcaaattagaatttagtttggatcgaaaaaaagaagaaaaaattacttcaacc
cctctactacaatatctcgcaaataagaaagaaaaacgacgggaggatgcaaaacgtaga
caagaagaaaagcgacgtcaacgtgacgaagacaaggaaaaacgaaagcaagtacaagta
acaaaaattatatcaaataatgaaggcgctgccgctggtgggggtaaaagtaataagtta
ggtgttggtaaagaaaatgttgttggcgagaaaagtggttcacagcaattacatgaggag
ggtaaaagttcacgatctcaacgtcgagctgaacgtaatcagaaaagaagggaagaattt
gaacgtaagcgccaggaaagggaaaaagtccttgaagtgaaatcaaaagtagatgccatt
gctggtagcgagcgaaagacgaaagagcaatcgctacaaggatgtaaagccgacgatggg
aaacagcagcaacgcaaagaaggtggaaaacgttatagtgaacgtcgcgaacgagatagg
aatcgcaaccgtaaggagaaggagaaggaaaaaccacaatcgactggagttgacggtatt
caaaagagcgaaagtacagcttctgaagcaatgaaagctgcagcagttgcagctgctggt
ggagaagctatagttagcgagtcagttatgaattttatacgtagtgtggctacagcaaag
gagtttgttcctaaacataagcaacaaaaaatggaagaactcaaaaatacatcgtctacg
gaaagcgttgcaccagcaaaagttgaaagggatcttgatgacaaagcatcagaagaagag
cagaaaaaggaaaattttttcggagaggaagacacgcgcactcaaaaacaacgcaatgca
gatgaacaacgtcgtattagaaataaggatcgaccctccatagccatctatcaaccaaaa
gcacgtttacgtatatccgaagagcgagatccgatttcctctcagcctcaaggtagtgtt
aagagtgacacccgtagcaatcccgcttcggattgtgaaagcatcaaaaaggaagaaacc
agaaccaaaaaagtttcccgttactctgagcgtcgagcggaacgtcgtaataacaaggat
aagcaaaagagctcttcagattcggctgatttggaaccaaaagtagaagcggcgcaatcg
ttcaaattagacgatatccctggtacttctgaacctttacaagacaatgagaaataa
DBGET
integrated database retrieval system
