Ceratitis capitata (Mediterranean fruit fly): 101453677
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Entry
101453677 CDS
T07533
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101453677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccat03041
]
101453677
03009 Ribosome biogenesis [BR:
ccat03009
]
101453677
Enzymes [BR:
ccat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101453677
Spliceosome [BR:
ccat03041
]
Complex A
U2 snRNP components
U2 related factors
101453677
Complex B
101453677
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
101453677
Ribosome biogenesis [BR:
ccat03009
]
Eukaryotic type
90S particles
Helicases
101453677
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
nSTAND3
SRP54
AAA_19
Flavi_DEAD
ABC_tran
ResIII
AAA_25
ATPase
T2SSE
PhoH
TsaE
AAA_30
AAA_7
AAA_23
HTH_IclR
Motif
Other DBs
NCBI-GeneID:
101453677
NCBI-ProteinID:
XP_004520252
UniProt:
W8CAQ1
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MSKRRIEVGETYGSKSKKDFEGSTPTFNNASTVAPITGAVAGAVRQPGTINPYNRKPYTQ
RYFNLYKKRITLPVFEYQADFMRLLNEHQCIVLVGETGSGKTTQIPQWCVEFALTKGKKG
VACTQPRRVAAMSVAQRVSEEMDVGLGEEVGYSIRFEDCSSPKTVLKYMTDGMLLREAMS
DPMLEQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQYFDNA
PLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEDIEGDILMFLTGQEEIEEACK
RIKRETDNLGTDIGELKCIPLYSTLPPNLQQRIFEPAPPRNANGAIGRKVVVSTNIAETS
LTIDGVVFVIDPGFAKQKVYNPRIRVESLLISAISKASAQQRAGRAGRTRPGKCFRLYTE
KAYKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLA
ALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEAK
KAADEAKMRFAHIDGDHLTLLNVYHAFKQSGEDPNWSYENFINFRSLKSADNVRQQLARI
MDRFNLKRSSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGHYLTIKDNQNVQLHPSTCL
DHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLTLAPQYYEMANFPQCEAKRQLEMLQQRI
ESKQFQKGF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagacgtatagaagtgggtgaaacgtatggttcgaagtcgaaaaaggatttc
gaaggatctacgcctacgttcaataatgccagtacggtggcaccaataacaggcgctgtt
gcgggtgctgtgcgtcagccgggcaccataaatccctacaataggaaaccgtatacacag
cgatattttaatctttacaagaaacgaattactctgccagtattcgaatatcaagctgat
tttatgcgtcttttgaatgagcatcaatgtattgttttggttggtgaaaccggttccggt
aaaactacacaaataccacaatggtgcgttgaatttgctttgacaaaaggtaaaaagggt
gttgcatgtacccaaccacgtcgtgtggctgctatgtcagttgcacaacgtgtttccgag
gaaatggatgtgggtcttggcgaggaagttggttactctattcgttttgaagattgctcg
tcccctaagacggtacttaaatacatgacagacggtatgttgctgcgtgaagctatgtct
gatcctatgttagaacagtaccaggtcatattgttggatgaagctcatgaacgtaccttg
gcgacagatattttgatgggtgtattaaaagaagttataagacaacgtagtgatttgaaa
ttagtggtgatgtctgccactttggatgctggcaaatttcaacagtatttcgataatgca
ccattaatgaacgttccaggtcgtacacatccagtagaaattttctatacaccagaacca
gaacgtgattatctcgaagcggctatacgaactgtcatacaaatacatatgtgcgaagat
attgaaggtgatattttaatgtttttaaccggacaagaggaaatcgaagaggcttgcaaa
cgtattaaacgtgaaacagataatctaggcacagacattggtgagcttaaatgcatacca
ctatactcgactttgccaccaaatctacaacagcgtatatttgagcctgcaccaccacgc
aatgccaatggtgctattggacgtaaagttgtcgtctccacaaatattgcagaaacatcg
ctaaccattgatggtgttgttttcgttattgatccaggctttgccaaacaaaaagtctac
aatccacgtatacgtgtagagagtttgcttatttcagccatttcaaaggcttcagcacaa
caacgtgctggtcgtgctggacgtactcgcccaggtaaatgcttccgcttatacacggaa
aaggcttacaaaaatgaaatgcaggataatacctatccagaaattttgcgttcgaatttg
ggcaccgttgttttgcagctgaagaaacttggtattgatgatttggtgcacttcgatttc
atggatccgccagcgccagaaacgcttatgcgcgctttagaattactcaattatttggct
gctttagatgatgatggcaatctaaccgatttgggcgcagtcatgtcggaattcccattg
gatccacagttggccaaaatgttaattgccagttgtcagcataattgctcaaatgagata
ctttcgattacggcaatgttgtcggtgccacaatgctttgtgcgtccgaatgaggctaaa
aaggcggcggatgaggcgaaaatgcgttttgcacacatcgatggtgatcatttgacattg
ctgaatgtttatcatgctttcaaacaaagcggcgaagatcctaattggtcttatgagaat
ttcataaatttccgttcattaaaatcagccgataatgtgcgtcaacagttggcacgtatt
atggatcgtttcaatttgaaacgcagcagcaccgaatttacatctaaagattattatgtt
aatatacgtaaggctttggtgcagggattcttcatgcaggtcgctcatttagagcgtacc
ggccattatttgaccataaaagacaatcagaatgtacagttacatccgtcaacatgtttg
gatcataaacccgattgggtaatctacaatgaatttgtgttgaccacgaagaactacata
cgcacagttacagatattaaaccggaatggctgctcactttggcgccacaatactatgaa
atggccaattttcctcaatgcgaagctaaaagacaattggaaatgctgcaacaacgcatc
gaatcgaagcaatttcaaaaaggattttag
DBGET
integrated database retrieval system
