Ceratitis capitata (Mediterranean fruit fly): 101453780
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Entry
101453780 CDS
T07533
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101453780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccat03021
]
101453780
Enzymes [BR:
ccat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101453780
Transcription machinery [BR:
ccat03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101453780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
BUD22
Motif
Other DBs
NCBI-GeneID:
101453780
NCBI-ProteinID:
XP_004537346
LinkDB
All DBs
Position
Unknown
AA seq
1648 aa
AA seq
DB search
MGTVKTMEIDMLPGDLEFGVFSSEEIKRLSVVKIITGLTFDPLGHPLPGGLYDNLMGSYG
RRMEPCSTCFNIQACPGHMGHIELNALVFNPFFIKLVQKMLSVFCLNCFKIQLKDHVCQI
LALQLRLIDAGYVVEAQELEIFKSEIVSQNEEHLVKLEGGDYVHPRIAAMFELLKKGKSN
ASNNTKTSCGIRSALVHAALQRVPFKKCIHCQKPLRNIRYLYRKLVYYITAAEMKNIMPE
VQQTVGQNKSIFADECRKFLRQIYDNYPELLKLLFPLLKLNASGNICPVDIFFMDTIPVI
PPKARPPNILHDQIVEHPQTGIYRAIIENNAVLRVVMKHLKGLREELPDEAQRVYESTRG
KSPYEKLYNAWQSLQTSVDLLLDITASRDSPSNQGLKQVLEKKEGLIRKHMMGKRVNYAA
RTVITPDPNINVEEVGIPDIFARKLSYPVPVTPWNVAELRKMVMNGPDIHPGANYIQDEK
GYTTLIPADNAAKRESMAKLLFNYPENGIKVVHRHVLNGDVLLLNRQPSLHRPSIMAHKA
RILPGEKTFRLHYSNCKAYNADFDGDEMNAHFPQSEVARAEAYNLVNVASNYLVPKDGTP
LGGLIQDHVISGVKLSIRGRFFNREDYQQLVYQGLSHLRHKIKLLPPTILKPTVLWSGKQ
VLSTIIINLIPEGYSRINLHTQAKINSKQWVVSPPHVAACAALGGGDLCESNVIIHKGEL
LTGVLDKQQYGATTYGLIHCMYELYGGEVSTHLLTAFTKVFTSFLQREGFTLGVQDILVT
ANADAQRRKIVKESRNVGDSAVAAALELEEIPSLDVLVEKMEDAYIKDPKFRVILDRKYK
ALLDGYTNDINRTCLPDGLISKFPQNNLQLMVLSGAKGSMVNTMQISCLLGQIELEGKRP
PLMISGKSLPSFTSFETSPKSGGFIDGRFMTGIQPQDFFFHCMAGREGLIDTAVKTSRSG
YLQRCLIKHLEGLTVGYDMTVRDSDSSVVQYLYGEDGLDILKSKFFNTNFCTQFLALNYT
SIIHSKELQNIKDEQTLLKISRHVKKIRKWHNKRMEKQIPGEAKRIRSAFAEFSGDTPTK
VNSLEVNPKTGRSIEYDYKRKLWRKADEETKEQYRKISTRCPDPTTAIYKQDNCYGSVSE
RLEKIVEEYKRKYPNSKAAIDDIIYIKNLKALVAPGEPVGLLAAQSIGEPSTQMTLNTFH
FAGRGEMNVTLGIPRLREILMLASANIKTPSMDIPINLNQTKNADKLRIKLNRVTLADIL
QFVNVKTKLVLRPERAYQYKLRFQFLPREAYQDDFCVRPKKVLKYMSQVFFKLLFRAVIK
SSKSRATLIDVSEDKGSSDKNLDEDDSRNETGEQSRKGKSTNSVEVDSSDDENANDDVDA
TGTKLKSRKQDETEYDDPEDLEEIQDAGDDDELVDSENEDEDQQDSGKTDTVDAMTETVL
SNDMVQEYTYDKEKHLWCKLTFNLNMKYKKPDISSIIRELAGKCIVHQVQNIKRAIIYKG
EDSQLLKTDGINIVEMFKYNDILDLNRLYSNDIHAIAKTYGIEAAAQVIIKEVTNVFKVY
GITVDRRHLSLIADYMTFNGSFQPLSRKGMEHSSSPLQQMSFESCLQFLKNAAGSGLVDE
LNSPSSRLMVGLPVRNGTGAFELLTKIN
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgggtactgtaaaaactatggaaatagatatgcttccaggtgatctggaatttggagtg
ttttcaagtgaagaaataaagcgactcagcgtcgtcaaaataataacgggcttaactttt
gatccacttggccatccattgcctggcggcttgtatgacaatttaatgggcagctatggt
cgacgaatggaaccatgttctacttgtttcaacattcaggcctgtcctggacatatggga
catattgaattaaacgctctggtgtttaatccattttttataaagctagtacaaaaaatg
ttaagcgtattttgtttaaactgctttaagatacaattgaaagatcacgtttgccaaatt
cttgcacttcaactacgcctgatagatgcgggatatgtggtcgaggcacaagagttggaa
atatttaaatcagaaatagtttcccaaaacgaagagcatttagtgaagcttgaaggtgga
gattacgtccatccccggatagcggccatgtttgaactcctaaagaaaggtaaatctaat
gcttctaataatacgaaaacttcatgcggaatacgctcggccttagtgcatgcagcactt
caacgagttccctttaagaaatgtattcactgccaaaagccactccgtaatattcgctat
ttatatcgcaaattggtatattatataacagcagcagagatgaaaaatatcatgccagag
gtacagcaaaccgttggacaaaataaatctatttttgccgacgaatgccgcaagtttctg
aggcaaatatacgacaattatccggaattgttgaaacttctgtttcctctattgaaatta
aatgctagtggtaatatttgccctgtggacatatttttcatggacacaatacctgttata
ccaccaaaagcacgtccacccaacatattacatgatcagattgttgagcaccctcaaact
ggcatttacagggcaataattgaaaacaacgctgttttacgtgtggttatgaagcatctt
aagggccttagagaagaattgccggatgaagcgcaacgtgtatatgaaagtactagagga
aaatcaccatatgaaaagctgtataatgcttggcaatctcttcaaacatcagtggatttg
ttgttagatataactgctagcagagattcaccttcaaatcaaggtctcaagcaagtttta
gagaaaaaagaggggttaatacgtaagcatatgatgggtaaacgtgttaactatgcggca
agaacagttattacgcccgatccaaatataaacgttgaagaagtgggtatacctgacatt
ttcgcacgcaagcttagttatccagtaccagtaacaccttggaatgtcgccgagttgcgt
aaaatggtgatgaatggtccagacatccatcctggagccaattatatacaagatgagaaa
ggttacacaacacttataccagcagataatgctgcaaaacgtgaaagtatggctaagttg
ctttttaattatcctgaaaatggtataaaggtggtgcatcgtcacgttcttaatggtgac
gtacttctactcaatcgtcaaccgtctcttcatcgaccttcaataatggcacataaagca
cgcattctaccaggcgaaaaaactttccggttgcattattcaaattgtaaagcatataat
gctgatttcgatggtgatgagatgaacgctcatttccctcaaagtgaagtagcgagggca
gaggcatataatcttgtaaacgttgcgagcaactatttggtgcctaaagatggcacacct
ttgggtggtttgattcaggatcatgttatatcaggtgtaaaattatcaatacgaggtcgc
tttttcaatcgagaggattatcaacaattggtttatcaaggtctttcacatttacgacac
aaaattaaacttcttccaccgacaattctaaaaccaaccgttctttggtccggaaagcaa
gtgctttcgacaataatcattaatttaatacccgaagggtattcacgaatcaatttgcat
acgcaggcgaaaataaattcaaagcaatgggttgtctctccaccacacgtagctgcgtgt
gctgcactgggtggcggtgatttatgtgagagcaatgttataattcacaaaggtgaactt
ttaaccggagttttggacaaacaacaatacggcgcaacaacttatggtttgattcattgc
atgtatgagttatatggtggcgaggtatcaacacatttactgacggcctttacaaaagtt
ttcacatcatttttacaacgagaaggatttacacttggcgtacaggatatattagtaacc
gctaatgcagatgcacaacggcgcaaaatcgtcaaggagagtcgcaatgttggtgattcg
gccgttgctgctgcattagagcttgaggagattccttcacttgatgtgcttgttgaaaaa
atggaagacgcctacatcaaagatcccaagtttcgtgttattttggatcgtaaatataaa
gctttactagatgggtacacaaacgatataaatcgcacttgtttacctgatggactcata
tcgaaatttccacaaaacaatttacaattaatggtactatccggtgctaagggatccatg
gtaaatactatgcaaatatcttgtttattgggacaaatcgagttggaaggcaaacgtcca
ccattaatgatatccgggaagtcgttgcccagttttacttcattcgaaacttcaccaaag
tcgggtggcttcattgatggccggttcatgacaggcattcaaccacaagattttttcttc
cattgtatggcaggacgtgagggtctcattgatactgctgtaaaaacatcacgttcaggc
tatttgcaacgatgcctgattaaacacctcgaaggtctgactgttggctatgatatgacg
gtgcgtgacagtgatagcagtgtcgtccagtatctttacggcgaagatggattggacata
ctcaagtcaaaattcttcaatacaaacttctgtacgcaatttttagcgcttaattataca
tcaatcattcattcgaaagagctgcaaaacattaaagatgaacagacgctgctgaaaatt
tcccgacatgttaaaaaaattcgcaaatggcataataaacgtatggaaaaacaaattcca
ggagaggctaagagaatacggtcggcatttgctgagttttcaggagatactcctacaaaa
gtgaattcacttgaagtaaatccaaaaacaggacgtagcattgaatatgattataagaga
aaactttggcgaaaagcagatgaggaaacaaaagagcaatacaggaagattagcacacgt
tgccctgatcccacaacagccatatataaacaagacaactgttatggtagtgtgtctgaa
cgattggagaaaatagtagaagaatataagagaaaatatcctaacagtaaagcggcaatt
gacgacataatatatattaaaaacttaaaggcgttagttgcgcccggtgaacctgttgga
ttactagccgcacagtcgattggcgaaccgtccactcagatgacattgaatacctttcat
tttgccggtcgtggtgaaatgaatgtgactctcggtattccacgccttcgtgaaatttta
atgttagcttctgctaacattaaaacaccctcaatggatattccaattaatttaaatcaa
acaaaaaatgccgataagctgcggattaagttgaatcgagttacgttggcggacatactg
caatttgttaatgtgaagaccaaactggtgctaagacctgagcgtgcatatcaatataag
ttacggttccaattccttccacgcgaagcatatcaggacgatttctgtgttcgaccaaaa
aaagtactgaaatatatgagtcaagttttctttaagcttttgttccgtgccgttataaag
tcgtcaaaaagcagagcgactttaatcgatgtaagcgaggacaaaggtagcagcgataaa
aatttggatgaggacgattcgaggaatgaaacgggtgaacaatctaggaaaggaaaatct
acgaactcagttgaagtagactcctcggatgacgagaatgctaatgacgatgttgatgct
acgggcactaagttaaagtcccgaaaacaagacgaaacagaatatgatgaccccgaagat
ttggaggaaatccaagatgcgggtgatgacgatgagctagtagatagtgagaatgaagat
gaagatcaacaagatagtgggaagacagatacggttgacgccatgactgaaaccgtattg
agtaacgacatggtacaggaatatacctacgacaaagaaaaacatctgtggtgcaagctc
acttttaatctcaacatgaaatacaagaaaccagatatatcctctattattagagagttg
gctggtaaatgtattgtacatcaagtccagaatataaagcgcgctataatatataaagga
gaagattctcaactccttaaaactgacggtattaacattgttgaaatgtttaaatataac
gacattctagatctgaatcgtttatattccaacgatatccatgctattgccaaaacatat
ggcattgaggcagcagctcaggttatcattaaagaagtgacaaatgttttcaaggtttac
ggcattacagtggataggcgacatctttctttgattgcggactatatgacttttaacggc
agttttcaaccactttcacgaaagggaatggagcattcgtcttcaccattgcaacaaatg
tcatttgaatcttgcttgcaatttttgaaaaatgccgcgggcagtgggctcgtagatgag
ctcaactcaccatcaagtcgtttaatggttggcttgccggtacgaaatgggacaggtgcc
tttgagttattaactaaaattaattaa
DBGET
integrated database retrieval system
