Ceratitis capitata (Mediterranean fruit fly): 101454044
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Entry
101454044 CDS
T07533
Name
(RefSeq) ATP-dependent RNA helicase p62-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101454044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccat03041
]
101454044
03009 Ribosome biogenesis [BR:
ccat03009
]
101454044
Enzymes [BR:
ccat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101454044
Spliceosome [BR:
ccat03041
]
Complex A
U1 snRNP components
U1 related factors
101454044
Complex B
101454044
Ribosome biogenesis [BR:
ccat03009
]
Eukaryotic type
Pre-60S particles
Helicases
101454044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101454044
NCBI-ProteinID:
XP_004525159
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MPQPRIGNRRDNGRGGAGNSGGGSNMRDGGRSRGGGGGGRGRDDGIRSGRVEKRFDDRGR
RGGTVGGGSNSNNDFAGLRTINWSDMRLPPFQKNFYQEHSKTRNRPPQEVERYRAAHQIT
VRGPAPNPIQYFDEACFPDYCLHEIRHQRYTEPTPIQAQSWPIAMSGSNLVGIAKTGSGK
TLAFILPAIVHINNQTPLQRGDGPIALVLAPTRELAQQIQTVANDFGSSVYVRNTCIFGG
TPKGKQANDLERGVEIVIATPGRLLDFLSNGVTNLRRCTYLVLDEADRMLDMGFEPQIRK
ILGQIRPDRQILMWSATWPKEVRQLAEDFLGSYIQVNIGSLELSANHNIRQYVDVCNEHD
KGAKLKDLLSHIYDQSHSPGKIIIFVATKKKVDELSRFINGFGVRVGSIHGDKSQIDRDN
VLAEFRSGRANILVATDVAARGLDVDGIKYVINFDFPQSSEDYIHRIGRTGRKHSTGTSY
AFFTRKNAKCARALIDILREANQNVNPELEYIARSAGSSGGRSRGGRGGNGNSGSSSMGY
KRRGGGNVFSSGGGMSGNSGSGSASGYGNGYRGGNVGGYSNNSTASGNYSNGGLRSRNYN
SRH
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaccccggattgggaatcgccgagataacggtagaggaggtgctggtaatagt
ggcggaggtagtaatatgcgagatggtgggcgaagcagaggtggtggaggtggtggcaga
ggacgcgatgatggtatacgttccgggcgtgtagagaagcggtttgatgatcgtggtcgt
cggggtggcactgtaggaggtggtagcaacagcaacaatgattttgccggactacgcacc
ataaattggtcagacatgcgcctgccgcccttccagaaaaacttctaccaagaacactca
aaaacccgcaatcgtcctccacaagaagtagaaagatatcgcgccgctcatcagataaca
gttcgtggtccagcacccaatcccatacagtacttcgacgaagcttgcttccccgattat
tgcctacacgaaattagacatcagcgatatacggaaccaacgccaatacaagcacaatca
tggccaatcgcaatgagcgggagcaatctcgtcggtatcgctaagactggttctggaaaa
actcttgctttcattctacccgctatagtacacataaataatcaaacgccactgcaacgc
ggtgatggacctatcgcgttagttttggcaccaacgcgagaattggcacagcagatacaa
accgtggcaaatgattttggctcgagtgtttatgtgcgtaacacttgtatatttggcggt
acaccaaaggggaaacaagcaaatgatttagagcgcggtgttgaaattgtaattgctacg
cccggtagattgctagattttctatcaaatggcgtaacaaatttgcgtcgctgcacttat
ctggtattagatgaagcagatcgaatgttggatatgggatttgagccgcaaatacgaaaa
attctcggacaaataaggcccgatagacagatacttatgtggagtgcaacatggccaaaa
gaggtgcgacaacttgctgaagacttcctcggatcatatatacaggtcaacataggctca
ttggagttatctgccaatcacaatatacgacaatatgtggacgtatgcaatgagcatgat
aaaggtgcaaaattaaaagatttactctctcacatatatgatcagtcgcactcgccgggt
aaaattataatttttgttgcaacgaagaaaaaagttgatgaactatcgcgctttatcaat
gggttcggtgtacgtgtcggctccatacatggcgataaatcgcagatcgatcgtgacaat
gtcttggcagagtttcgtagcggtcgtgcaaatatcttggtggcaaccgatgtagccgcg
cgaggtttggatgtggacggcatcaagtatgtcatcaactttgattttccacaatcgtcc
gaagactatatccatcgaataggtcgtaccggacgcaaacattccacgggtacatcatat
gcatttttcacacgaaagaacgccaaatgtgctcgagccttgattgatatactgcgtgag
gccaatcaaaatgtcaatcccgaattagagtatatagcgcgaagtgctggctcaagtggt
ggtcgtagtcgtggtggacgtggcggaaatggtaatagtggtagcagcagcatgggatat
aagcggcgtggtggtggaaacgtatttagctctggcggcggcatgagtggaaattctggt
tcaggctcggcgtctggctacggcaatggctatcgtggtggaaatgtcggggggtatagt
aataatagcactgctagtggtaactattcgaatggcggtttgagatcgcgtaactacaat
tcacggcattaa
DBGET
integrated database retrieval system
