Ceratitis capitata (Mediterranean fruit fly): 101454714
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Entry
101454714 CDS
T07533
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101454714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccat03021
]
101454714
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101454714
Transcription machinery [BR:
ccat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101454714
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101454714
U7-dependent histone pre-mRNA processing factors
101454714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Internalin_N
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
101454714
NCBI-ProteinID:
XP_004536894
UniProt:
W8CAQ0
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSQRNDERVPAEESDLLQIKPLGAGQEVGRSCIMLDFKGKKIMLDCGIHPGLSGMDALPY
VDLIEADEVDLLFISHFHLDHCGALPWFLMKTSFRGRCFMTHATKAIYRWMLSDYIKISN
ISTEQMLYTEADLEASMEKIETINFHEERDVMGVRFCAYNAGHVLGAAMFLIEIAGVKIL
YTGDFSRQEDRHLMAAEIPPIKPDVLITESTYGTHIHEKREDRENRFTSLVQKIVQQGGR
CLIPVFALGRAQELLLILDEYWSQNPELHEIPIYYASSLAKKCMAVYQTYINAMNDKIRR
QIAVNNPFVFRHISNLKGIDHFDDIGPCVVMASPGMMQSGLSRELFENWCTDPKNGVIIA
GYCVEGTLAKSILSEPEEITTLAGQKLPLNMSVDYISFSAHTDYQQTSEFIRLLKPQHVV
LVHGEQNEMSRLKMALQREYEADTSTTIKFYNPRNTHSVELYFRGEKTAKVMGNLAATKP
EAGNKLSGVLVKRDFKYHLLAASDLSKYTDMSMSVVTQRQSIPWNSSLGTLKLLLDRIGG
VGTTEILEEEKRLRAFKCIDLLVEGKIIIMEWQATPVNDMFADSVLACVMQTEMGGTNIK
GASTTSKSDNTHFRECLVETLQDTFGEHSVPKMFKGDLLPVTVAGKRAEVNLDTLQVHCP
EDENLRQVVNTAVQKLHQALVTHS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaagaaatgatgagagggttccagcagaagaaagtgacctattacaaataaaa
ccacttggtgccggtcaagaagttggaagatcttgtattatgttggactttaaaggaaag
aaaattatgcttgactgtggcatacatccaggtttatccggaatggacgcattaccgtat
gtggatttaatagaagctgatgaagttgatctcctcttcatatcacattttcacttggat
cactgtggcgccctgccatggtttcttatgaagacgagcttccgtggtagatgttttatg
acgcacgccacaaaagctatatatcgttggatgttatcggattatataaaaattagtaat
atttccactgagcagatgctctacacggaagctgatttggaggcatcgatggaaaagata
gaaacaatcaattttcatgaggaacgcgatgtaatgggtgttcgtttctgtgcttataat
gcagggcacgttctcggagctgctatgtttctgattgaaattgcgggcgtaaaaatttta
tacactggcgatttttcccgacaagaagatagacatttaatggcagccgagatccctccc
attaaaccagatgtactcataactgagtctacatatggcactcatattcacgaaaaacgt
gaagatcgtgaaaatcgattcacttcattagtgcaaaagattgtacaacaaggtggacgc
tgtttgatacctgtttttgctttaggacgtgcccaagaattgctacttatattggatgaa
tattggtcgcaaaatcccgaattgcatgagatacccatttactatgcctcatcattggct
aaaaaatgtatggcggtgtatcagacctatattaatgcaatgaacgataaaattcgacgt
caaatcgctgtgaacaatccatttgtatttcggcacatatccaatctgaagggtatagat
cactttgacgatatcgggccatgtgtagtaatggcctcgcctggtatgatgcaaagcggt
ttatcacgagaactattcgaaaactggtgcacagatccaaagaatggtgtcatcattgca
ggttactgcgttgagggcaccttggctaagtccatactttctgagccagaagaaataact
accttggctgggcaaaagctacccttaaatatgtctgtggattatatttcattctccgcc
catactgattaccaacaaactagtgaatttatacgtttactaaagccgcaacatgtggta
ttggtgcatggagaacagaatgaaatgtctcgtctaaaaatggctctgcaacgagaatat
gaggctgatacttctaccaccataaaattctataacccccgtaacacacattccgttgag
ctgtacttccgtggcgaaaaaacagccaaagttatgggcaatttggcggcgaccaagccg
gaggcgggcaacaaattatccggagtcctcgtgaagcgtgactttaaataccaccttctt
gctgcctctgatctatctaaatacaccgacatgagtatgtccgttgtaacacaaagacaa
tccattccatggaatagttcattaggtaccctaaaactacttctagatcgaattggtggt
gttggtacaacggagattttagaagaagagaaacgtttacgtgcatttaaatgtatagac
ttattagtagagggtaaaatcattataatggaatggcaagctacacctgtaaacgatatg
tttgccgattcagtattggcctgcgtaatgcaaacagaaatgggtggtacaaatattaag
ggtgcttcaacaacatccaaatcagataacacgcatttcagagagtgtttggtagaaact
ctgcaggatacatttggcgagcattccgtgccaaaaatgttcaaaggtgatctcttgcca
gttacggtagcaggaaaacgggccgaagtcaacttggacacattacaagtgcattgtccg
gaagatgaaaatttgcggcaagtggtcaatacagcggtacaaaaattacatcaagcactg
gtcactcattcttga
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