Ceratitis capitata (Mediterranean fruit fly): 101455197
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Entry
101455197 CDS
T07533
Name
(RefSeq) uncharacterized protein LOC101455197 isoform X2
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101455197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccat03021
]
101455197
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101455197
Transcription machinery [BR:
ccat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101455197
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
101455197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
Pcf11_C
Pfc11_Clp1_ID
zf_PCFS4
Pcf11_helical
GTP-eEF1A_C
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
101455197
NCBI-ProteinID:
XP_004517564
LinkDB
All DBs
Position
Unknown
AA seq
2261 aa
AA seq
DB search
MDTSMKTKEENEARVAEEYLSSLSDLTCNSKPLINMLTMLAEENIGCASVIVKVVEQHIV
KVPPDIKLPLLYLIDSIVKNVKSTYIHLFSQCIVNIFCDVFEKVNEKVRERMYALRLTWN
EVFPAQKLYALDVKVKRIDNNWPITAKQAQPSIHVNPNFLKQNYELKVQAGDVEEILQAK
TRELLELKKRKLELELEATKKSLEEQDKQLSKVTNGLMQPDAMNAMPGVRMPGVPPQIMP
PGMMPPGIMPPHHMHPRASHPALMSGAGVPPATLFHPNFHQTRPQQPTHVPVGMMNMPQN
FPPASGVNKPKVHPVNPALLNTIRHRDPRLARQQQMQESAPSMRGSSKSSSSSSASRSAD
DAHKADSKSSSSSYRNGSSKSSRGDVGSTASESRHTSSSSTERTRKGSSTRDKDKDRKRS
ESKSSTSSGGSSSSERHKSSSSSTATGVISSRSSKKSTSTKCDKDAFEIAPLSTTFKRKS
STTSLSGSESSSSSRKKDAKRKTHTSPTSQKHRSRSRSPIETAINSASINISADRDDRLA
IPAFSSKNQSKGPSAIRSDSDHEEELKNAALRIEKKNIKIVTDGCLAFAAQTDTDLRQFL
NPIAAYAPNLEQSVRSAEAAAAKVENTTTIAFTPTTTTTSAKVSFKIQKMFNKLDKSTAQ
QQQHHQQTTLALMSTAGASTTTTAGPIVLDHDDDMMPATITSSSSTTTATANAKNATTAN
NNIMSTKGSRAGAAVDDADGRDDGVRIGASISSSASVGRHNSSDSIEQQLSKAKVATLSS
KEFDVEPMDIDKVKVSEKSDEKKRLSSPNEDRDEPLPKKSRSAKFDALFGDEDVDLRTVM
PPQILAVQQHLQKKPHRRESKSPEPPPPPFITDEQNAESWNNLKTSKTPKSTSPSKKSST
LDDVRAKLAKATKYSKLNKSEKSNKDLTRVKLSEPQLNDDSQDANDEKIRTIVAQAQELL
EANSINQDQYKNLMQKVMSINESSKLKEAKKRESLGAGQTAQTSKQAAVAEETAEEQRAA
AAREAVLKKRIPKLRRVSVPTADNNANSSSTSTAAATEQTNSGSNPSTTRSPIYEERSND
NTDVVLPQRAKPQREKRVKPSKWGEKIDSSINPTLANNNLNQPKPWTKGNMMRPHPGVGG
FRGGPPPNMPNMNNMHPSSMPWQMQMPPNGGPPFVPAGPMIRSSVPPPPQAPILPIIPLP
PSIPKPCNSIDNPQADLVRTITIDGLSKEIRIYDQVAIVFMELDQPREIGFQAGQRSIII
DDQPPIALQFNDDYKTFNISGQPHRLRFGFPSRELYIDDQWYEIYFGGPPVSIPVQNRIH
ILKAEGPPPQVNIGALRRDLVVGKINMIVDAHIVIPLFLDAKPQTFKLGNQDHTVQFADN
LLTVLLDGEPAKVEYGGLPKSYLLGGVSYFIRFGALPQGLKPGLIAVKDMIYVKTEPPAP
QPLIPAIAASANATTDVKPAESMKSEIEAKTEISVMAEQAVPLLTTENKTDAAVKAPVTE
QLTDETSEPQVVGTAGSGNSAIPIFSATALNKINIDELFQKLVSSGILGGGGAGNVIAPS
NKDAGVLPSAAAPEEELPQPIAIQPIDLGKSETIKTRQMALVDTLFSGMQCSSCGVRFPP
EQTIKYSQHLDWHFRQNRRERDQSRKAHSRKWYYDLADWVQYEEIEDLEEREKNFFEAQQ
NDIETVDETSNQKWLNSPTPLSCPALPEDVDRACDMCQEKLEQFYHEETEEWHLRNAIRV
NDKIYHPLCYEDYKAALNAKDEKPDKKTEEAPAGGDMEADDDVIIKIEGDDHSDVEGTAA
KSTDNAMDDDDDDVIVLPNEEPSVTEIEDDDEYVPESVPPTSEKATIDVDSDDENKKEEM
EIVKEAGEEEENDAADADAAGSDVEIQEPHIPFTDLDTYVEKEQPEADETSQMSFMNVKI
KEEPKDDDEDEDDGFEDVGTVVIPLDEEISIQSSEETQTQTITSSTSGMSPTAERPPSSQ
SLVQVDETEFTEGSAAPIELNTSIDGNPGNEEDEHNLSTVGPSPAIPLASLVNKIKINIA
KSSITANSNSNNNSNNTGSSTSQTGAAIPTTTNTLATNNSMNSSSSSPTKGSTTTSDAFH
AGDDNAENAANVGDTTAAQYSNVSAISVVSTIPVLCGGGTMSARTMTTVAPPQPAVSSSS
NLKSIAANDESSVSTISVIGSYSGSSSTPRYFPPSTTSSAASVTAAASRRQTTAPPKPST
PPPPEEETPSYELKPALQSAKLKKMTKVKCGVETSGLCSVM
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggatacatctatgaaaacgaaggaagaaaatgaagcgcgggtggcagaggaatatctt
tctagcttatctgatcttacttgcaacagtaaaccattaataaatatgctaactatgtta
gcagaggaaaatattggatgtgcttcagtgatagtaaaagtggtggaacaacacatcgtt
aaggtaccgccagatataaagttgcctttgctatatttaatagattcgattgtgaaaaac
gtaaaaagcacatatattcatctcttcagtcaatgtattgtaaacatattctgcgatgtg
tttgaaaaggtcaatgaaaaagttcgtgagcgtatgtatgcgttacggctcacttggaat
gaggtttttcccgcacagaaactttacgcattggacgtgaaagtgaagcgtattgacaac
aattggccgatcacagcaaaacaagcacaaccatccatacacgtgaatcctaacttcctt
aagcaaaattacgaactcaaagttcaagctggtgatgtagaggaaatcttgcaagctaaa
acacgagaattgctagagttgaaaaaacgtaagctcgaactggaattggaggcgacgaaa
aagagtttggaagagcaagataagcagctgtctaaagtaacaaatggtctcatgcaacct
gatgccatgaacgctatgcccggtgtacgaatgccaggtgtgccgcctcaaataatgcca
cctggcatgatgccacccggcataatgcctccacatcatatgcatccacgtgcatcgcat
cccgctctgatgagtggcgctggtgtaccaccagcaacactatttcatcctaattttcat
caaaccaggccacaacagccaacacacgtaccagtcggcatgatgaatatgccacagaat
tttccacctgcaagcggcgtcaacaaaccaaaagtgcatccagttaatccggcattgctc
aataccataaggcatcgtgatccacgtttggcgcgccaacaacaaatgcaagaatcggcg
ccgtcaatgcgtggctcatcaaaatcctcttcttcgtcgtcagcatcacgcagtgccgac
gatgcacataaagctgacagcaagtcatcctcgtcatcttatcgcaacggtagcagcaaa
agtagtcggggtgatgttggtagcacagcttcagaaagtagacatacttcctcatctagc
actgaacgcacacgtaaaggcagctcaacgcgcgacaaagataaagatcgcaaacgtagt
gaatcgaaaagttcaacatcttccggtggttcgagttcctctgagcgtcataagagctct
tcgtcgagcacagcgacgggcgtaatcagcagtcgcagcagtaaaaaatcgacaagtact
aaatgtgataaggatgcttttgagatagcaccactttcaacgacattcaaacgcaaatct
tctacaacatcgctgtcaggcagcgaatcatcgtcgtcgtcacgcaaaaaagatgcgaaa
cgcaaaactcatacatcaccaacatcgcaaaaacatcgttcacgcagtcgttcaccaatc
gaaacagcaattaacagcgcgagcattaatattagtgccgatcgtgacgataggcttgca
ataccggccttctccagcaagaatcaatcgaaaggacccagtgcaatcagaagtgattct
gatcatgaggaggagctgaaaaacgctgcattaagaatagagaagaaaaatattaaaata
gtgaccgacggatgtttggcatttgctgcgcaaacggacactgacttaaggcaattccta
aatccaatcgctgcgtacgcgccaaatttagagcaaagcgttagatcagccgaggcggcg
gcggcgaaagtagaaaataccactacaatagcatttactcccacaacaacaaccacatcg
gcaaaagtgtcgtttaaaattcagaaaatgtttaataaattggacaaatctacagcgcaa
caacaacaacaccaccaacaaacaacattggcattaatgtcgactgcaggagcctcaaca
acaacaacagcgggaccgattgtactcgatcatgacgacgatatgatgccagcaacaata
acatcatcatcatcaacgacaacagcaactgccaatgctaagaatgcaacaacagcaaac
aacaacatcatgtcaacgaaaggaagcagagctggcgcagcggtggacgacgctgatggt
agagatgatggtgttcgcattggcgctagcattagtagcagcgcaagcgttgggcgtcat
aacagctcggactccatagagcagcagttgagcaaagctaaggtggcaacgttgtcgtca
aaggaattcgatgtggagcccatggacattgataaggttaaggtcagcgagaagagtgat
gaaaagaagcgactctcctcaccaaatgaagatcgggatgaacctttgcccaagaagagt
agatcagcgaaattcgatgctttattcggtgatgaagatgttgatttacgtaccgttatg
ccaccacaaatactagctgtacaacaacacttgcagaagaagccacacagacgtgaaagc
aaatcgcccgaaccaccgccaccaccatttatcacagacgagcaaaatgcggaaagctgg
aacaatttgaagacctcaaaaacgcctaaatccacttctccttcgaaaaaatcatcgacc
ctggatgacgtgcgcgccaaactggcaaaagcaacaaaatatagtaaactcaacaaaagt
gaaaagtctaacaaagatttaacgcgtgtgaaactttcagagccacaattaaatgatgat
tcacaagatgccaacgatgagaaaatacgcaccatcgtggcacaggcacaagagctactc
gaagccaactccattaatcaggatcaatataaaaatcttatgcagaaggtcatgtccata
aatgagtcgagcaaattgaaggaggcgaaaaaacgcgaatctcttggcgctggtcaaaca
gcgcaaacgtcgaagcaggcagcggtagctgaggaaacggctgaagagcagcgcgcagcc
gccgcacgtgaagctgtactcaagaaacgtataccaaagctacgccgcgtttcagtacct
acggccgataataatgctaatagcagtagcacgtcaactgctgccgcaacggagcagact
aatagtggcagcaacccatcaacaacgcgttcaccgatttatgaggagcgcagcaatgac
aacacggatgtagtgttgccacaacgtgctaagccacagcgtgaaaaacgtgtgaaacct
agcaagtggggtgagaaaattgattcgtccattaacccgactctggcaaacaacaatcta
aatcaacctaaaccatggaccaagggcaatatgatgcgtccacatccaggtgttgggggc
ttcagaggtgggccaccacccaatatgcccaacatgaacaatatgcatccatcatccatg
ccctggcaaatgcaaatgccacccaacggtggtccaccatttgtgccagctggcccaatg
atacgcagcagcgtgccgccaccaccacaggcaccaatattgccaattataccactaccg
cccagcataccgaaaccctgcaattccatcgataatccacaagccgatctagtgcgtacg
ataactatagatggtctctccaaggagatacgcatttacgatcaagtcgccattgtattt
atggaactggatcagccacgtgaaatcggttttcaagccggacaacgctcgatcatcatt
gatgaccaaccaccgattgcgttgcaattcaatgatgactacaaaaccttcaacatcagc
gggcagccacatcgtctacgtttcggttttccatcgcgtgaactatacatagatgatcag
tggtatgagatatattttggtgggccgcccgtttctatacccgtacaaaatcgtatacac
atactgaaagcggagggaccaccgccacaagtgaatatcggtgcgctgcgtcgtgacttg
gttgttggcaaaatcaatatgatcgtcgatgcacacatcgtcataccgttgttcttagat
gcgaaaccgcaaacctttaaattgggcaatcaagatcacactgtacagttcgcggataat
ttgcttaccgtgttgttggatggtgaaccagcgaaagtggagtatggtggcttgccaaaa
agctacttgctcggcggtgtaagctatttcatacgctttggcgctctgccacaaggcttg
aaaccgggtctaatagcggtaaaagatatgatttatgtaaaaacggagccaccagcacca
cagcccctcataccagctatcgcggcaagcgcaaatgccacaactgatgtaaaaccagct
gagagtatgaagtcagagattgaggctaagactgaaatcagcgtcatggccgaacaagct
gtgccactactaactaccgaaaacaaaacagatgcagctgttaaagcgcccgttacggag
caattaacggatgaaacgagtgaaccacaggtggtgggcaccgcaggcagtggcaattcg
gctataccgatattctccgcaacggcattaaataaaatcaacatcgatgaactattccag
aaactagtctcatctggcatattgggcggcggtggcgctggtaatgttattgcgccgagc
aataaagatgctggtgttttgccatcagccgctgcgcccgaagaggagctaccacaacca
attgccatacagccgattgacttaggcaaatcggaaacgattaaaacacgtcaaatggca
cttgtggacacactcttttctggcatgcagtgcagtagttgtggtgtgcgttttccgcca
gagcaaactattaaatatagtcagcatttggactggcatttccggcagaatcgtcgtgag
cgggaccagtcacgcaaagcgcattctcgcaaatggtactacgatctcgccgattgggtg
caatatgaggagattgaagatttggaggagcgtgaaaagaatttctttgaagcgcaacaa
aatgatatcgaaactgtcgatgagacatccaatcagaaatggctcaattcaccgacgcca
ctcagttgtccagcattaccggaagatgtggatcgcgcttgtgatatgtgtcaagagaag
ttggagcaattctatcacgaggaaactgaggaatggcatttacgtaatgccatcagggtg
aacgataagatatatcatccgttatgttatgaggattacaaggctgcgctcaatgctaag
gatgagaagcctgataaaaagacggaagaagctccggctggcggggatatggaagctgac
gatgatgtcattattaagattgaaggcgacgaccacagtgacgttgaaggtactgctgcg
aaaagcaccgataatgccatggatgatgatgacgatgacgttatcgtattgccgaatgaa
gaaccttcagtaacagaaattgaggatgacgatgaatacgtgccagagagtgtaccgccc
acgagcgaaaaagctaccattgacgttgattcagatgatgaaaacaaaaaagaggagatg
gagatcgtgaaggaagcaggggaggaggaagaaaatgatgcagctgatgcagacgccgct
ggatcagatgtagaaatacaagaaccacacattccattcacagatttggatacatatgtg
gagaaagagcaaccggaagccgatgaaacatcacaaatgtcattcatgaatgtgaaaatc
aaggaagaacccaaggatgacgacgaggatgaagatgatggattcgaagatgtaggcact
gtggtgataccgcttgatgaagaaatttccatacagagtagtgaagaaacccaaactcaa
acaattacatcgtcaacgtccggcatgtcgcccactgccgaacgcccaccatcctcacag
tctctcgtgcaagttgacgaaacagaattcactgaaggttcggctgcgcctatcgagttg
aatacctccatcgatggcaatccgggcaatgaagaagatgaacataatctatccacagtt
ggtccatcacctgcgataccattggctagcttagttaataaaattaaaataaatattgct
aagagtagtataacagcaaatagtaatagtaataataatagtaataatactggtagcagc
acctcccaaacaggtgcagccataccaacaacaacaaacacattagccaccaacaattca
atgaatagtagtagtagtagtcccacaaaaggttcaacaacaacgtctgatgcctttcac
gcaggcgacgataatgctgagaacgccgcaaacgttggcgataccaccgcagcgcaatat
agcaatgtctcggcaataagtgtggtatccacaataccggtactgtgtggcggtggtact
atgagtgcacgaaccatgacgacagtagcacctcctcagccggcggtgtcgagcagtagc
aatttaaagagcatagctgccaatgatgagtctagtgtaagtacgatatctgttattggc
agctatagtggctcatcctccacaccgcgctacttcccaccatccacaaccagcagcgct
gcttcagtaactgcagctgcatccaggcgtcaaacaacagcgccgccaaagccgtcaacg
ccaccgccaccagaagaggagacgccgtcgtacgagttgaaacccgcgctgcaaagtgcg
aaactcaaaaaaatgactaaagtaaaatgcggcgtcgagacatcgggactctgttctgtt
atgtaa
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integrated database retrieval system
