Ceratitis capitata (Mediterranean fruit fly): 101455534
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Entry
101455534 CDS
T07533
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03013
Nucleocytoplasmic transport
ccat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101455534
09122 Translation
03013 Nucleocytoplasmic transport
101455534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101455534
03041 Spliceosome [BR:
ccat03041
]
101455534
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101455534
Spliceosome [BR:
ccat03041
]
Complex C
Other components
EJC/TREX
101455534
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101455534
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
101455534
NCBI-ProteinID:
XP_012161544
LinkDB
All DBs
Position
Unknown
AA seq
1736 aa
AA seq
DB search
MRRLRTSTKAQTAGAVIATTATKSGSGGGGGSTSSTGGITPHADIRQTRSNSGGSGGTSG
DITNSNSTGSVGITVTTIVAATTTTVSRQKHNMDAKLSGDVFKNFEKTGKSEFLKFLKQQ
VKENDNPIFGKNDEFKFGISRAIYDLLWHGLRCTLKKDTVLNTLADVVTLHTDFPSVILD
IVNILDAETSLMTDGIQEERLMFSQIVKDLDKVISDKLIKERLEIDTLQDVGIVKNKVFY
TKFIKIKTKLYYKQRRFNLFREESEGYAKLITELNQDFEEDATATSIMDIIKSLIGCFNL
DPNRVLDIIIESFETRSERRHLFIPLLRAYMPNGSIICEVLGYKFRYFAETRTPRSLFHV
CSLLLKYGVIELHDIYQWLTPVDKSIISEWESDLSEAKEFVRKLNIIVTNKDKEQVEPEI
EKPYDVEKYYANQKFGLCEGLLKVGDWENAYKIIKKLPEQSVIVHEPIARALAELIHISI
DYVYTDKCFKANSRRSKLTDDKKLLQKIQAREFSQLRNYTIPMVIALGPAMHYDTVLMYK
LIRILRTIMTDMGVDSLNAPPPNTESETLYFEVMTVIDAAILPALSYLDCNCPMAEEIWT
VLKFFPYHFRYSLYARWKNDTYLVHPVLIRRRGLAHKNIKALMKRVSKENVKPVGRLIGK
LSHCAPGFLFDYILLQIQIYDNLIGPVVDSLKYLTSLSFDCLGYCLIEALAMADRDRFKH
DGTSISLWLQSLASFCGAIFKKYNIELSGLLQYVANQLKSQKSLDLLILKEIVQKMAGVE
SAEEMTNEHLNAMCGGELLRGEAGYFSQVRNTKKSSQRLKDALANNDLAVAICLLMAQQK
HCVIYRETAQSHLKLVGKLYDQCQDTLVQFGTFLGSTYSVDEYVERLPSIIAMLQEYHIN
ADVAFFLARPMFTHQINQKYDQLRKADPNAKKLTTNQKLQKYLEATNLIMNPIVESVRPL
HGPKVWEDISPQFLVTFWSLSMYDLQVPAESYQKEISKLKQLSLQAAESKDSNASKNKKE
QERYIALMDKLQDERKKQQEHVDKILQRLQQQKDNWFLSRSAKSAKNETITQFLQLCLFP
RCTFTALDALYCAKFVHTIHNLKAANFSTLLCYDRIFCDITYSVTSCTENEATRYGRFLC
AMLETVMRWHADQAVFNKECANYPGFVTKFRVSNQFSEANDHVGYENYRHVCHKWHYKIT
KAIVFCLDSKDYMQIRNALIILMRILPHYPVLAKLAQIIERKVEKVREEEKNKRPDLFVI
ASSYIGQLKTKAAQMIKESDFHQVTERQLRVESAAAAAIAAGNTISAAQIVNAVAQINAN
ATTNSASANANVVSLVDAANKTATTVQPAAHREVTPVTAKQVSNGDVKGEKREKEKQPKQ
IIKMEREPITSNISNNSPIELDTRSSTVVINERSSEHGDRHSSSRSLKDVKKEERTRERE
RERERENQREREKERERELREREREKEREREQRERERELRELREREREHRSHNDELDLSG
GGGGGVGGGSAGGTLTSGSTMISTRSKRDKRRGEERYRLESPAVEHIEVMENKHEHHEYE
RERDRERERERARDLSSVSNESNGSSMHRRSQDIIEYDKDTKRRKVEAASTTASSNSKKQ
VLDDLLENTKKERGVKNKERKEKLSEEEKDARKERKMGRKRERLEENTNTEHKRRREVQN
GDDDLRERDKYHTREKSPHLRSETRERSHEKFERDRSTREERLYGTSKSARSRIGY
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgattgcggacctccacgaaagcgcagacggctggagcagtgatcgctacgacg
gcaacgaaaagtggaagcggtggtggcggtggatctacatcgtcaacaggaggaataaca
ccgcatgcagatattaggcaaactcgtagcaatagcggtggtagtggtgggactagtggc
gatataacaaatagcaacagcacaggttctgtaggaataacagtcaccactattgttgca
gcaacaacaacaaccgtgagccgtcaaaaacacaacatggacgcaaagctgagtggagat
gtatttaagaactttgaaaagacaggaaagagtgaatttttgaagttcttaaaacaacaa
gtgaaggaaaatgataatccgatttttggcaaaaatgacgaatttaaattcgggatctcc
agggctatctacgacctactatggcatggactacgttgcacattgaagaaagacactgtg
ttgaatactctagcggatgttgtgacgttgcatactgatttcccttcggttatcttagat
attgtaaatatattggacgccgaaacttccttaatgactgatggcatacaagaagagcgt
ctcatgtttagtcagattgttaaagatctcgataaggtgatatcagataagcttataaag
gagcgcttagaaatagatacactacaagatgtagggattgtgaagaataaggtgttctac
accaagttcattaagataaaaacaaagctttactacaagcagcggcgctttaacctcttc
cgggaggagagtgaaggatatgctaaactgattacagaattaaatcaagactttgaggaa
gatgccacagcgacaagcataatggatattataaaatcactaattggttgctttaatttg
gatcctaatcgcgtacttgatatcataattgaatcctttgaaacacgttcagaacggcga
catcttttcataccgctgttacgtgcgtacatgccaaatggttcaattatatgtgaagta
ctcggttataaatttcgttattttgctgagacaagaacaccgcgttcactctttcatgtt
tgctcactacttttgaaatatggcgttattgaattacatgatatttaccaatggcttaca
ccagtcgacaagtcgattataagcgaatgggaaagcgatctatcagaagcaaaagaattt
gtgcgcaaactaaatattattgtaacaaataaggataaagaacaagtagaaccagaaata
gagaaaccctatgatgtggaaaaatattatgccaaccagaagtttggcttgtgtgaaggt
ttgctcaaagttggtgattgggaaaatgcatataagataataaaaaaattacctgaacaa
tcggttatagtacatgagccaatcgcacgtgccctagccgaattaatacacatctccatt
gattatgtttacaccgataaatgttttaaagccaattcgcggcgttcaaaattgactgat
gataaaaagttattacaaaaaatacaagcgcgtgaattttcacaattgcgcaactatacc
ataccgatggtgatagcattgggtcccgctatgcattatgacacagtgctaatgtataaa
cttatacgcattttgcgtacaataatgacagatatgggtgtggatagcctgaatgcgcca
ccgcctaatactgaatcagaaacgctctactttgaagttatgactgttatagatgcagct
atattaccagcgctttcgtacctagattgcaattgtcccatggctgaggagatttggact
gtgttgaaattctttccgtaccattttcgttatagtttatatgcacgttggaaaaacgac
acctatttggtgcatccggtgcttatacgtcggcgtggtttggcacataaaaacattaaa
gctttaatgaaacgcgttagtaaggagaacgtgaagccggtagggcgtctaatcggcaaa
ttgagtcattgtgcgccaggctttctttttgactatattttgctacaaatccaaatctat
gacaatttaattggtcctgttgtggattccctaaaatatctaacatcactctcatttgac
tgtttgggctattgcttgatcgaggctttagcaatggcagatcgagatcgtttcaagcat
gacggcacttcaatttctttgtggttacaaagtttagcttctttttgtggtgcaatattt
aaaaaatataatattgaactgagtggtctgctgcagtatgtggccaatcagctgaaatcg
caaaagagcttggatcttttgatactaaaggaaatagtgcaaaaaatggctggcgttgag
tcggctgaagaaatgactaatgagcatttaaatgctatgtgtggtggcgagttgttgcgt
ggcgaggctggttattttagtcaagtgcgtaatacgaagaagtcttcgcaacgcttgaag
gatgcgctcgccaataatgatttagctgttgccatttgtttgttaatggcacaacaaaaa
cattgtgtaatctatcgtgagactgcgcaaagccatcttaaacttgtgggtaaattatat
gaccaatgtcaggatactttagtacaattcggcacttttctcggttctacatattcggtg
gatgaatatgtcgagcgtttgccatcaataattgccatgctgcaggagtatcacatcaac
gcagatgtagcattctttttggctcgtccaatgtttactcatcaaattaatcaaaagtac
gatcaattgcgcaaggcagacccaaatgctaaaaaattgaccaccaatcaaaaattgcaa
aaatatttagaagccactaatttaattatgaaccccattgtggagtcagtgcgtccatta
catggtccaaaagtgtgggaggatattagtcctcaatttttggtgactttttggtcgcta
agcatgtatgatttacaagtacccgccgagagttatcagaaggaaatttccaagctcaaa
caattatcactacaagctgcggaatcaaaagattcgaacgcgtctaagaacaagaaagaa
caggaacgttatattgctttgatggataagctacaggatgaacgtaagaaacagcaagag
catgtcgataagattctgcaacgtttacaacaacaaaaggacaattggttcctttcacgc
tcggcaaagtcggcaaagaatgagaccataacgcagtttttgcagctttgcctgtttcca
aggtgcaccttcactgccctcgatgccctctattgtgcgaaattcgtgcataccatacac
aacttaaaggctgccaatttttcgacgttgctttgttacgatcggattttctgcgacatc
acctactcggttacgtcatgcaccgaaaatgaggccacacgctatgggcgcttcctttgc
gccatgctagaaaccgtaatgcgttggcatgccgatcaggctgttttcaataaagaatgc
gccaattatcccggttttgttaccaaatttcgtgtcagtaatcaattctcggaagctaac
gatcacgttggttatgaaaactatcgtcatgtctgtcataagtggcattataaaatcacc
aaagcgattgtcttctgcttggactctaaagattatatgcaaatacgtaatgcactcatc
atactaatgcgtatattgccacattatcctgtgctcgccaaattggcacaaattattgaa
agaaaagtggagaaagtgcgtgaggaggagaagaataaacgtccggatttgttcgttatc
gcctctagctatattggccagttgaagacaaaggcggcgcaaatgattaaagaaagtgat
tttcatcaggttaccgaacgacaactgcgcgttgaatccgctgccgctgcggctattgct
gccggaaatacaatcagcgctgcacagatagtcaatgcagttgcgcaaattaatgcgaat
gctacaacaaatagtgcaagcgcaaatgcgaatgttgtcagtttggttgatgcggcaaac
aaaactgcgacaacggtacaacctgcggcacatcgtgaagttacgcccgtaacggcaaaa
caagtcagcaatggtgatgtgaagggtgaaaaacgcgagaaagaaaaacagcctaagcaa
attattaaaatggaacgtgagcctataacgagtaatatttcaaataactcacccatcgag
ttggacacgagatcatctacagttgtaataaacgaacgcagcagtgagcatggtgatcgc
catagcagtagtcgttcgctgaaagatgttaaaaaggaagaacgtacacgtgaacgcgaa
cgtgagcgtgagcgggagaatcaaagggagcgcgaaaaagaacgcgaacgtgagcttagg
gagcgtgaaagagagaaggaacgtgaacgggagcagcgtgagcgagaacgtgagctgcgt
gagttgcgcgaacgtgagcgcgaacatcgcagtcataatgacgaattagatttatcaggc
ggcggtggcggtggtgtaggaggtggtagtgctggtggtactctcactagtggcagcact
atgatttccacacgctccaagcgcgacaaacgacgcggcgaagaacgttatcggctagaa
tcaccggctgtggagcatatcgaggtaatggaaaacaaacatgaacaccatgagtatgaa
cgtgaacgagatcgggaacgcgaacgtgaacgtgctagggatttgagttcggtatcgaat
gagagcaatggttcatcgatgcatcgacggagtcaggatataattgaatatgacaaagac
acgaaacgccgcaaagtggaagccgcctcgacgactgcttcatcaaactcaaagaaacag
gttttagatgatttgcttgagaatacaaagaaagaacgcggcgtcaaaaataaagagcgc
aaagaaaagctatccgaggaggagaaggacgcacgtaaagaacgcaaaatgggacgtaaa
cgtgaacggctggaggagaataccaatacggagcataagcggcgtagagaagtacaaaat
ggcgatgatgatttgcgtgagcgtgacaaatatcatacaagagaaaagtcaccacacctg
cgcagtgagacgcgtgaacgctcgcatgagaagttcgaacgtgatcggagcacacgtgag
gagcgtttatacggcacttcaaagtctgcacgttcgcgcatcggttactaa
DBGET
integrated database retrieval system
