Ceratitis capitata (Mediterranean fruit fly): 101455726
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Entry
101455726 CDS
T07533
Name
(RefSeq) superkiller viralicidic activity 2-like 2 isoform X2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101455726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101455726
03041 Spliceosome [BR:
ccat03041
]
101455726
03009 Ribosome biogenesis [BR:
ccat03009
]
101455726
03016 Transfer RNA biogenesis [BR:
ccat03016
]
101455726
Enzymes [BR:
ccat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101455726
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
101455726
Spliceosome [BR:
ccat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
101455726
Complex C
U4/U6.U5 tri-SnRNP related factors
101455726
Ribosome biogenesis [BR:
ccat03009
]
Eukaryotic type
Pre-60S particles
Helicases
101455726
Transfer RNA biogenesis [BR:
ccat03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
101455726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
DEXQc_Suv3
ResIII
Helicase_C
ATPase_2
Motif
Other DBs
NCBI-GeneID:
101455726
NCBI-ProteinID:
XP_004520977
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MADVDDLFDCFNDDNTDNVAANPVVVIDQVKPAGSLTERNNESGEKRGFETIKEVQENDE
VPIKRLKDTESILDDICVDALRSRIAVHVIESPESCTHEVAVYPGQEYIPLQPLAGPPAK
EYPFVLDPFQKEAILCIDNQQSVLVSAHTSAGKTVVAEYAIAKSLGCKQRVIYTTPIKAL
SNQKYREFNEEFKDVGLVTGDVTINPSASCLIMTTEILRNMLYRGSEIMREVGWVIFDEI
HYMRDKERGVVWEETLILLPDNVRYVFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRPT
PLQHYIFPAGGDGIHLIVDEKGQFKEDNFTTAMAVLQNAGDAAKGDQRGRKTGIRGVDSG
QSNIFKIVKMIMERNFAPVIIFSFSKKDCEVYAMQMAKLDFNTAEEKKLVDEVFNNAMDV
LSEEDRQLPQVENVLPLLKRGIGIHHGGLLPILKEIIEILFGEGLLKALFATETFAMGLN
MPARTVLFTAPRKFDGKKFRWISSGEYIQMAGRAGRRGLDDKGIVILMIDEKVSPSIGRG
IVQGKADPINSAFHLTYNMVLNLLRVEEINPEYMLERSFFQFQNQSSIPELYKQVQDKQT
ELAKIKITEEHSVASYHHIREQLDSYGKQFRRWITKPEYLVPFLQPGRLIKVQNEKDEFD
WGIVVNFKKQTNNAKNPLKAETVIVVDVLLHVTEDSAKADEPKPCKQGQKGNMEVVPVLH
SLISQISSLRVYYPNDLRPADNRRSVLKTIAEVKKRFPKGPPLLNPVTEMNIKSDEFKQI
VDSIGKFEERLFAHPLHNSTELENIYARYTNKLKVQEELKAVKTKLKEARSLLQMDELKH
RKRVLRRMEYCTAADVIEFKGRVACELSSADELLLTEMIFNGIFNEITTAQSVALLSCFV
CDEKSSETPKATEELSGPLRSMQDLARRIAKISTECKLNVDEETYVEKFKPFLMDVVLSW
CKGASFLSVCRMTDIFEGSIIRCMRRLEELLRQLCQAAKTIGNTELENKFSEGVRLLKRD
IVFAASLYL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgttgacgatttatttgattgtttcaatgatgacaacactgataacgtagcc
gctaacccagttgtggttatcgaccaagtgaagcctgcaggctctctcactgaaagaaat
aatgaaagtggtgaaaaacgcggatttgaaacaattaaagaagtgcaggaaaatgacgag
gtccctataaagcgattaaaagatactgaatctatattggatgatatatgtgtagatgca
ttacgctcacgcatagctgtacacgttattgaaagtccggagtcatgtacacacgaagta
gcagtatatccgggacaggagtatattcctctgcagccacttgccggtccacctgcaaaa
gaatacccgtttgtcttggatccttttcaaaaggaagcaatcctatgcattgataatcaa
caaagtgttctagtttcagcacatacatcagctggtaagacagtagtagctgaatatgct
attgccaaatcattaggttgcaaacagcgtgtaatctatactacccctatcaaagcgctt
tctaaccaaaaatatcgcgaattcaatgaagagtttaaagatgtgggtttagttactggc
gatgttacaataaatccgtcagcttcttgccttattatgactactgaaattttaagaaat
atgttgtaccgaggaagtgaaataatgcgagaagttggttgggtcatatttgacgaaatc
cattatatgcgtgacaaagaaagaggtgttgtatgggaagaaacattaattttattgcct
gacaatgttcgctacgtatttctctctgctactataccaaatgcgcgacaattcgccgaa
tgggtttgccatcttcacaagcagccatgtcacgtcgtttacacagattaccggccaacc
ccacttcaacattatatatttcctgctggaggcgatggcattcatctcatagttgacgaa
aaaggtcaatttaaagaagataattttacaacggcaatggctgttttgcaaaatgcaggc
gatgctgctaaaggtgatcaaagaggtcgaaaaactggcattagaggtgttgacagtggc
cagtcaaatatttttaaaattgtgaaaatgataatggagcgcaattttgcgcctgttatt
attttttcattcagtaaaaaagattgtgaggtttatgcaatgcaaatggcaaagttagat
tttaacactgctgaagaaaaaaaattagtagacgaagttttcaataatgccatggatgtt
ctctctgaagaagatcgccagctgccacaagttgaaaacgtattgcctctactgaaacga
gggattggtatacatcacggtggacttttgccaatcctaaaagaaattatagaaatttta
tttggtgaaggattactcaaagcactatttgcaaccgagacatttgcaatgggtttgaat
atgcctgctcgtacggtactatttacagcaccgcgcaaatttgatggaaagaaattcagg
tggatttcatctggagaatacatacaaatggcaggtcgagctggtcggcgtggtcttgat
gataaaggtattgttattttaatgattgatgaaaaagtatctccttcaattgggcgtgga
atagtacaaggaaaagctgatcccataaattcagcatttcatctaacttacaacatggtg
ctaaatttgttgcgcgttgaggaaatcaatccggaatacatgttagaacggtcattcttt
cagtttcagaatcaatcgtcaataccagaactttacaaacaagttcaagataaacaaacc
gaattggccaagattaagatcaccgaagagcatagcgttgcttcttatcatcatatacga
gaacaactagattcatatggaaaacaatttaggcgttggattacaaaacctgaatatcta
gttccttttctgcaacccggtcgtctcataaaagtgcaaaatgaaaaggacgaatttgat
tggggtattgtagtgaattttaaaaagcaaacaaacaatgcgaaaaatcccttaaaagcg
gaaacagttatagtagtagatgttttactgcatgttacagaggattccgcaaaggccgat
gagccaaaaccatgcaaacaagggcaaaaaggtaacatggaagttgttcctgtactgcat
tctcttatttctcaaatttcttcacttcgtgtttactatccaaatgatttacggccagcc
gataatcgtcgaagtgttttaaaaacaattgcagaagtgaaaaaacgatttccaaaagga
ccacctctacttaatccggtaacagaaatgaatataaagagtgatgagttcaaacagata
gtggattctattggtaaatttgaagaacgcctatttgcacatccactacacaattctaca
gaattagaaaacatttacgctcgatacactaacaaattaaaagtccaagaggagctaaaa
gcagtgaagacgaaattgaaggaggcgcgtagtttgctccaaatggatgaattaaaacat
cggaaacgtgtattgcgccgtatggagtattgtacagctgccgatgtaatcgagtttaag
ggacgcgttgcttgtgaattaagttctgcggatgaacttcttctaaccgaaatgattttt
aatggtatatttaatgaaattactactgcgcaatcagtagcattactgtcttgtttcgtt
tgcgatgaaaagtcttcagaaacaccaaaggctactgaagaactgtcgggtcccctgcga
tccatgcaagatttggctcgtcgtattgctaaaatttcaacggagtgtaagctaaatgtg
gacgaagaaacgtacgtggagaaattcaaacctttccttatggacgtcgttttgtcatgg
tgtaagggggcttcctttttaagtgtgtgcaggatgacagatatttttgaaggttcaata
attcgctgcatgcgtcgtcttgaagaacttttaaggcaattatgccaggcagcaaaaaca
atcggtaatacagaattggaaaacaaattttctgaaggagtgcgacttcttaaaagagat
attgtttttgcggcttctttatatttataa
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