Ceratitis capitata (Mediterranean fruit fly): 101456030
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Entry
101456030 CDS
T07533
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101456030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccat03041
]
101456030
Enzymes [BR:
ccat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101456030
Spliceosome [BR:
ccat03041
]
Complex A
U2 snRNP components
U2 related factors
101456030
Complex B
101456030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
101456030
NCBI-ProteinID:
XP_004525003
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MSKFYSGRDRDRERDRERDRERERDRDREKEREREKRRYSRSRSRSPKESKSFRNDNGNN
RGRDDRKKDREREQREIDRNRRDDKRRKRSRSKSIPKDYDRDKSRFLDREREKERERERE
REREQRERDRERERDRDRGRERERERERDRERDRDREKEREQEREMDVDSRRAPVPPIVK
TVTEESSSSSEEELDKEEEQRRLEQEMIKRRERIERWRAERKLKELEGSKKDLKNLQLQI
PIISSKKWSLEDESEEEDNNQTAPTNDIKKEPDSPPPKFQRLKKLNDDEDENDEKPKLKK
LSKLDNDDDNETEKVTKTDIEEEDDIDPLDAYMQEVDKEVRNVNHIVTQPKKQQGVVILT
GVAKKSTEKTNKGELIEQNMDSLEYSSEEELEDIKDTAANLANKHRKELAKIDHSGVNYA
SFRKNFYVEVPELARMTHQEVDKYRTDLEGIQVKGKGCPKPIKAWAQCGVSKKEMDILRK
LGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPPLEDGDGAIAI
IMAPTRELCMQIGKDIRKFSKSIGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDM
LAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEA
LARRILKKPIEVIVGGRSVVCKDVEQNVAILEDEAKFFKLLELLGVYQEQGSIIVFVDKQ
ENADILLRDLMRASYPCMSLHGGIDQFDRDSTILDFKSGKVRLLIATSVAARGLDVKDLI
LVVNYDVPNHYEDYVHRCGRTGRAGKKGTAWTFLTAEQARYAGDIIRALELSEAKVPEDL
QKLWTDYKTGQEAEGKKIHTGGGFSGKGFKFDEQEANAAKENKKLQKAALGLADSDDEED
IEQDIDQQIEQIFAAKRTVKDTSVPVPTAATTVTATGTTAAPTVTSVPVAASGSDKLELA
KRLASKISTTKNLTADGKVNPQVSAETILKGGNAAQPMITARSVVEQLAAKLNNKLNYQP
KDDEDGANPLLPNQPNSFTKYEEELEINDFPQQARWKVTSKEALAQISEYSEAGLTVRGT
YVPPGKNPPEGERKLYLAIESCSELSVQKAKREITRLIKEELLKLSSAHHVFNKGRYKVL
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaattttattctgggcgagatcgcgacagagaacgtgatcgtgaacgggaccga
gaaagggaacgtgaccgcgatcgtgaaaaggaaagggagagagaaaagcggcgttattcc
agaagccgctcaagatcaccaaaggaaagcaaatcattccgaaatgacaatggtaacaat
agaggacgtgatgatcgcaaaaaagacagagaacgggagcaacgagaaattgaccgtaac
aggcgtgatgataaacggcgaaagcgttccagatctaaatctatacctaaggattatgat
cgtgacaaatcaagattcctagatcgtgaaagagagaaagaaagagaacgtgagcgagaa
cgagagcgtgaacaaagagagcgggatagagaacgcgaaagagacagagaccgaggtcgg
gagcgtgaacgtgagcgtgaacgagatcgggaacgggatcgcgaccgtgaaaaggagaga
gaacaggaacgtgaaatggatgttgatagtaggcgtgccccagttccacctattgtaaaa
actgtaaccgaagaatcaagcagttcttcagaagaagaactagacaaagaagaagagcag
cgtcgcctcgaacaggaaatgataaaacggcgggagcgtattgaacgctggcgcgccgaa
cgtaaacttaaagagttggaaggaagtaaaaaagatttaaaaaatttgcaactgcaaatt
ccaattatcagttcaaagaaatggagtttggaagatgaatctgaagaggaagataataat
caaacagctcctacaaatgatattaaaaaggagcctgattcacccccaccaaaattccag
cgtttaaaaaagctaaatgatgatgaggatgaaaatgatgagaaaccaaaactaaaaaag
ttatccaaacttgataatgatgatgataatgaaactgagaaagttaccaaaactgatata
gaggaagaggatgatattgatccattggatgcttacatgcaagaggttgataaggaagta
cgcaatgtcaatcacatcgtaacacagccgaaaaaacaacagggtgtcgttatactcaca
ggtgtagccaaaaagagtacagaaaagacaaataaaggagagctaattgaacaaaatatg
gacagtcttgaatattccagtgaagaagaattggaggacattaaagacactgccgcaaat
ttggccaataaacatcgaaaagaattggctaaaattgatcactctggtgtgaattatgcg
tcgttccgtaagaatttttatgttgaagtacccgagttggcgcgcatgacgcatcaggaa
gtggataaatatcgcaccgatctagaaggcatacaagttaaaggcaaaggttgtccaaaa
ccaattaaggcttgggcgcagtgtggtgtgagcaagaaagaaatggacatattacgaaaa
ctcggctttgagaaaccaactccaatccagtgtcaggcgattccggccattatgtctgga
cgagatttgataggtattgctaaaactggcagtggcaaaacgctcgcatttattttacca
atgtttaggcacatactggatcagccgccattagaggatggtgacggtgctatcgctata
atcatggcgccaacgcgtgaactgtgcatgcaaattggcaaggatattcgaaaattttcg
aaaagtatcggtctacgtcctgtctgcgtttacggtggcacgggcatttcggagcaaata
gcggaattgaagcgtggcgctgaaataattgtttgcacacccggacgcatgatcgatatg
ctggctgccaactctggacgcgtcacgaatttacgtcgggtcacttacattgtgctagat
gaagctgatcgtatgttcgatatgggctttgagccacaagtgatgcgtattatcgacaat
gtgcgaccagatcgacaaacggttatgtttagcgcaacttttccgcgacaaatggaagca
ctcgcccgccgtatactgaagaagcctatagaggtaattgttggcggacgttctgtggta
tgtaaagatgtcgagcaaaatgtagcaatattggaggatgaagcgaagttctttaaattg
cttgagctcctcggtgtttatcaggaacaaggcagcataattgttttcgtagataaacaa
gagaatgcagatattttgctcagagatcttatgagggcttcgtatccatgtatgagctta
catggaggcatcgaccagttcgatcgcgattccaccattttggacttcaaatcaggcaag
gtacgcttgttgattgcgacttccgtggctgctcgtggcttagatgtcaaagatttaata
ttggtggtaaattatgatgtaccaaatcactatgaagactatgttcataggtgtggtcgt
acgggacgtgctgggaagaaaggtaccgcatggacttttctcacagcagagcaagcccgc
tatgctggcgatatcatacgtgcacttgaactatctgaggcgaaagttcctgaagatcta
caaaaactttggactgattataaaacgggacaagaggccgaaggcaaaaagatacatacc
ggtggtggctttagtggcaaaggtttcaagttcgatgaacaagaagcaaatgctgcaaag
gaaaataaaaaattacagaaagcggcacttggcttggcggactccgatgacgaggaagat
attgaacaagatattgatcaacaaattgagcaaatatttgcagcgaagcgtacagtgaaa
gatacatctgtaccggtaccaactgccgccacaacggttacagcaacaggcacaactgct
gcaccaactgtgactagtgtaccagttgcggcttccggatcagataaattagaactggcg
aaacgccttgcgtcgaaaataagtactacaaagaacttaaccgcagatggtaaagtgaat
ccacaagtttctgctgaaactatactgaaaggtggcaatgcagctcaacctatgataaca
gctcgttcggtggttgaacaactagctgcaaaactgaataataaattgaactatcagcct
aaagacgatgaagatggcgcaaatcctttgttgcccaatcagccgaattcgtttacaaaa
tatgaagaggagttggaaattaacgatttcccccaacaagctcgttggaaagtaacatcc
aaagaagcgttggctcaaatatcagaatactctgaagctggtctaaccgtgaggggcact
tatgttccgccgggtaaaaatccacctgaaggtgagcgcaaattatacttggctattgag
agctgtagtgaactgtctgtacagaaggcaaaacgcgaaattacacgacttatcaaggag
gaacttttgaaattgagttctgctcatcacgttttcaataaaggcagatataaggtgctc
tag
DBGET
integrated database retrieval system
