Ceratitis capitata (Mediterranean fruit fly): 101457336
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Entry
101457336 CDS
T07533
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101457336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101457336
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101457336
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101457336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
101457336
NCBI-ProteinID:
XP_004533874
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVAEGVETFEDIWKKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSQLLDNRRLIETQMERFKIVERETKTKAYSKEGLGAAQKTDPAQRK
KDEARTWLTSSISSLQLQIDQYESEIESLLAAKKKRLDRDKQDRMDEFRAKLDRNKFHVM
KLETVLRLLDNDGVEAEQVNKIKDDVEYYIESSQEPNFEENEFLYDDIIGLDDVELSGTG
VSLGIPSSATTDSNNSNETSGSPSSITSGGSPVQSPAPASGVQQQIMTAATAAATAASTI
NTTAAAATQQQQTNINNSMNYAAEAAAAAAAATASATSNTDATASDKRNKNESNSSSKAK
QPVKPTAVRAANSSSKSSSGSTSETPSSKAVSSTPNKNHNQQQQPTAAAVVAAAMAPTMA
GSTANSIVGGAPTLAATVAAMAAGHTPALQQHAPAPSLNTSNTTGTAAGGMTTVAAAVAA
NNASNNSNSNIQGQSVIQATPTIAFAAVAKNNTSHLENGPVHPVTSYAMTAPTVASNTQH
QQQQQQQLSNLQTNSSHLQNAHNNTSNNNAANSLANAVQQGSAAAAAAAAAAAAAAVGVV
NNVGSNNLANCISPNGLSQVIGAQQQQQQQVIGVTNNSSRASPGLLSPKHMNGLPISAAN
INNNNNNNNNNNNSVDAISLKTMAQEAINRSVIDTNSLTQGPGQQQMDNRQQQLQQQQQQ
QQQAPQSQQVLQHFSNDTTANQQQQQQQQQQQQQQAGGLAAAAVAFAAAAAATNGPTTAG
AGTVGGGLAGITNAGVGQPGAGNAPVGSKPHQQQQQPTNEAHITPLLGVAPLGTLPLHKD
HQLQFKMMEAAYYHLPTPADSERLNIYLPRTPVPTPQHYPQQQLPLYDTVEFYQRLSTET
LFFVFYYMEGSKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKIINDDYEQGTYIYFDYE
KWSQRKKEGFTFEYKYLEDKELN
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaagttgcaaggtgaaatagacagatgtctgaaaaaagttgcggaa
ggagtggaaacgttcgaggatatatggaaaaaagtgcataatgcgacaaacagtaatcag
aaggaaaaatatgaagcagatcttaaaaaagaaatcaagaagcttcaaaggcttcgggat
caaattaaatcatggattgcttcgggagagattaaagataaaagccagctgttggataat
cggcgtctcattgaaacgcaaatggaacgtttcaaaattgtagaacgtgaaacaaaaaca
aaagcgtattcaaaagaaggtctcggcgctgcacaaaaaacagatccagctcaacgtaag
aaagacgaggcacgcacctggctaacatcttcaattagttcattgcaattgcaaatagat
caatatgaaagtgaaatcgaatcgttattggcggctaaaaagaaacgtctcgatcgagat
aaacaggatcgaatggatgagtttcgcgctaaattggatcgaaataaattccatgttatg
aagttagaaacagtgttgagattacttgacaatgatggcgtggaagcagagcaagtgaat
aaaatcaaggatgatgtagaatattatattgaatcctcacaagaacccaatttcgaagag
aatgagtttctttacgatgacattattggcctggacgatgtggaattatctggtacaggt
gtttcacttggtattccatcatcagccacaacagacagcaacaacagcaacgagacgagc
ggttcgccgagcagcataacatcgggcggaagtccagtgcaatcgccagcgcctgcatca
ggtgtccaacagcagattatgacagcagcgacggcggcagcaacagcggcgtctacaatt
aacacgacggcagcggcggcaacgcagcagcagcaaactaatatcaacaacagcatgaat
tatgcagcggaagcagctgcggcggcggcggcagcgacagcgtcagcgaccagtaataca
gatgcaacagccagcgataagaggaacaaaaatgagagtaattcaagcagcaaagcaaaa
caacctgttaagccaacggcagtgcgtgcagctaatagcagcagtaaatcttcgagcggc
tcaacatcggaaacgccttcaagcaaagcagttagttcgacgcccaataagaatcataac
caacaacaacagcctacggcagcggcagtagttgctgcagcaatggcaccaacgatggca
ggcagcacagcgaacagcatagttggtggtgcgcccacattggcagcgacagttgcggca
atggctgctggacacacgcctgcattgcaacagcacgcgccggcgcctagtttgaatacc
agcaatacaacgggcacagcagcgggtggcatgacgacggtagcggcagcagtggcggct
aataatgccagcaacaacagtaacagcaacattcaaggccaatctgtgattcaagcgacg
ccaacgattgcatttgcggctgtagcgaaaaacaatacatcacatcttgaaaatggacct
gtgcatccggtgacttcatacgcgatgacggcccccacggtggcgtctaatacgcagcat
cagcagcaacagcaacaacaattatccaatcttcaaacgaattcctcacatttacaaaac
gcgcataataacacttccaataacaatgcagcaaatagtttagcgaatgccgtgcaacaa
ggtagtgcagccgctgctgcagcagccgccgccgcagccgctgcggctgttggtgtagtg
aataatgttggcagtaacaatttagcaaattgcatttctccaaacggcttgtcacaggtg
attggagcacagcaacaacaacagcagcaagttattggtgtaacaaataacagttcacgc
gcctcgcccggtctgctgtcaccgaagcatatgaatggcttgcctatatcagcagcgaat
ataaacaacaataataataataataacaacaacaacaattcggtagatgcgatttcattg
aagacgatggcccaggaagccataaatcgttcggttattgatacaaattcgctgacgcaa
ggacctggtcagcaacagatggacaacagacaacaacaactgcagcagcagcagcaacag
cagcagcaagcgccacaatcacagcaggtcttgcagcatttctcaaatgatacaactgcc
aatcagcaacaacagcaacagcagcagcaacaacaacaacagcaagcgggtggtttggca
gcagcagcagtcgcatttgctgccgccgccgcagcaacaaatggacccacaacagcagga
gcgggcacagttggcggtggtctggcgggcataacgaatgccggtgtcggtcaaccaggc
gctggtaatgcgccggtgggtagcaaaccgcatcagcaacagcaacagcccactaacgaa
gcacatataacaccattgcttggtgtggcaccacttggcacattgccgctgcataaagat
catcaattacaattcaaaatgatggaagccgcttattatcatctaccgacgccagctgat
tcggagcgattaaacatatacctgccgcgtacgccagtgccgacaccacagcattatcct
cagcaacagcttccactctacgataccgttgaattttatcaacgtctctcgaccgaaacg
ctcttctttgttttctattatatggaaggttcgaaggcgcaatatttagcagcgaaagca
ttgaaaaagcaaagctggcgatttcacacaaagtacatgatgtggttccaaaggcatgag
gaaccaaaaattattaacgatgattacgaacagggtacgtacatctattttgattatgag
aaatggagtcaacggaaaaaggagggattcacatttgaatacaagtacttagaggacaag
gagttgaattaa
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