Ceratitis capitata (Mediterranean fruit fly): 101457488
Help
Entry
101457488 CDS
T07533
Name
(RefSeq) ATP-dependent RNA helicase DBP2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101457488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccat03041
]
101457488
03009 Ribosome biogenesis [BR:
ccat03009
]
101457488
Enzymes [BR:
ccat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101457488
Spliceosome [BR:
ccat03041
]
Complex A
U1 snRNP components
U1 related factors
101457488
Complex B
101457488
Ribosome biogenesis [BR:
ccat03009
]
Eukaryotic type
Pre-60S particles
Helicases
101457488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
SNF2-rel_dom
Utp25_C
Motif
Other DBs
NCBI-GeneID:
101457488
NCBI-ProteinID:
XP_004526181
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MFDRRNGDRGASGMGGMGGMGGGSGGYRDQQRGGPMRGNALARPRPAPYARGGAGGSGAP
FRGGPPRSGFNDRRMDGGNNTGTPGDRLPTIIWSEIKLTPFQKNFYQPSTTVAQRSKTDV
DGYLTTNEVTLKGDGIPSPNIEFSEPGFPEHVLSEIKKMGFAKPTAIQAQGWPIALSGRD
MVGVAQTGSGKTLAYVLPAVVHISHQARLERGDGPIALILAPTRELAQQIQQVANDFGSQ
THVRNTCIFGGAPKQPQARDLERGVEIVIATPGRLLDFLERGVTNLRRCTYLVLDEADRM
LDMGFEPQIRRIIKQIRPDRQVLMWSATWPKEVRNLAEEFLDNYIQINIGSLTLSANHNI
LQIVDVCEESEKDNKLIKLLSEISAESETKTIIFVETKKRVDEITRIIGRSGWRVCAIHG
DKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTG
RSNNTGTAYTLFTTSNANKANDLIQVLREANQVINPRLVEMASSSGYNNKRNSRGGYQSR
GGSHMGGGYANRGNRAYGNNSVGGVGGAQGYQHRPQQPANSGGQMYQRPSGPPSRFSAAP
PQGGYGRSQHAAGNKPYAGVGTEGADKRPRFNPHQQPPPQQSSSYQQQPPRVPYGANANS
HQGHNAHHQPPPNHRGAPHAGGSAAPGAASAMYSHAPPSHHHSAGGAHYAVPSGNMFAYP
PPPLPVQN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatagacgtaacggtgatcgcggtgcttctggaatgggtggaatgggcggtatg
ggcggcggtagtggcggctatcgtgaccagcaacgtgggggtccgatgcgtggtaatgct
cttgcacgtcctcgtcctgcaccctatgcacgcggtggtgctggtgggagcggtgctcct
tttcgcggtggacctccgcgttccggtttcaatgatcgtcgaatggacggcgggaataac
actggcacgcctggagatcgcctgcctaccataatttggtctgaaataaagctaacacca
ttccaaaaaaatttctatcaaccaagtacgaccgtcgctcaacgttcgaaaacagatgtt
gatgggtatctgaccacaaatgaagttactttaaaaggcgatggcattccttcgccgaat
attgagtttagtgagccgggttttcccgagcatgtattatcagaaattaagaaaatgggg
tttgctaagccaactgctatacaagctcagggttggccgatcgctctaagtggacgggat
atggtcggtgttgcacaaactggctcaggtaagacgcttgcatatgtgttaccagctgtg
gtgcacattagtcatcaagctcgtttggaacgtggagatggaccaattgctctgattttg
gcaccgacacgtgaattggctcaacagatacagcaggttgctaacgattttggttcacaa
acccatgttcgaaatacatgtattttcggtggcgcaccgaagcaaccacaagctcgtgat
ttggaacgtggtgttgaaatcgttattgctacgccgggtcgtctcttagacttcttagaa
cgtggtgttaccaacttgcgtcgttgtacatatctggtattagacgaagctgatcgtatg
cttgatatgggttttgaaccacaaatacgccgcataattaagcaaattcgtccagatcga
caagtactaatgtggtcagccacctggcccaaagaagttcgtaatttggcggaagagttc
ctcgacaactatattcagattaatattggctcattgacgttgtcagctaatcacaatata
cttcaaatagtagatgtatgtgaagagagtgagaaagataataagcttattaagcttttg
tctgagatttctgccgagtcggaaactaagactatcatcttcgttgagacaaaaaaacgc
gttgatgaaatcacccgaattattggacgtagtggatggcgcgtatgtgccattcatggc
gacaaatctcaacaagagcgagattttgttttgtcgtcattccgtaatggccgccactca
attttggtggcgacagatgtagcagcacgcggcttagatgtcgacgatgtaaaatttgta
attaattacgattacccttcgaattcggaggactatgtgcatcgcatcgggcgtacaggg
cgttcaaacaatacgggaacggcatacaccttgttcaccacttcaaacgctaataaagcc
aatgacttgatccaagtgctccgcgaagctaatcaggtcatcaatccacgtctagttgaa
atggcttcgtcgtcaggctataataacaagcgaaattcacgcggtggctatcaaagtcgt
ggtggtagtcatatgggaggtggttatgccaaccgaggtaatcgtgcatatggtaacaac
agtgttggtggtgtcggtggagcacaaggatatcaacaccgcccacaacaaccggcaaat
agtggaggtcaaatgtatcaacgtccgagtggaccgccttcgcgcttctcagcggcccct
ccccaaggtggctatggccgaagtcagcacgccgctggaaataagccttatgccggtgtc
ggaactgaaggcgctgataagcgtccgcgctttaatccacatcagcagcctccgccgcaa
caatcgtcgtcttaccaacaacagccacctcgcgttccctatggagcgaatgctaatagt
caccaaggccacaatgcacaccatcaaccgccaccaaatcatcgaggagctccacatgct
ggcggtagtgctgctccgggtgctgcgtctgctatgtactcacatgcacctccttcccat
catcattccgctggcggtgctcattatgccgttccctcaggcaatatgtttgcttatcct
ccgcctcctttgcccgtgcagaattaa
DBGET
integrated database retrieval system
