Ceratitis capitata (Mediterranean fruit fly): 101457526
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Entry
101457526 CDS
T07533
Name
(RefSeq) exosome complex component RRP43 isoform X1
KO
K12586
exosome complex component RRP43
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101457526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101457526
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101457526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
101457526
NCBI-ProteinID:
XP_004537739
LinkDB
All DBs
Position
Unknown
AA seq
289 aa
AA seq
DB search
MTFKKCILFIYQLVKDLVMAEQHKLIYPIKHFRDFLENDIRLDGRSFDKYRPIGVNIESF
QHSLGSSATKIGNSNILCGIRAELAKPRASTPLAGYIVPNVDMSFTSFSKSAATSNNQNV
AEILECFIYRILNESHCLKLEDLCIHPGKLVWCLYIDIIGLEVDGGVFDASILACASALS
TLKLPKVTYDEKSGKIEIGEEMKELHLDIFPVVSTYSIFDNVVLVDPTYREESISNAVFH
LGVHEDTVGLFHKSGGVPISVKEIQHSIKNAVKREQEISSLLRSLKSNK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaagaaatgtattttgtttatttaccaattggttaaggacttggttatggct
gagcaacataaattaatataccccataaaacattttcgtgatttcctcgaaaatgatatt
cgtttggatggccgttcatttgataaataccgaccaattggtgtaaatatagagtccttt
caacactcgttaggttcaagtgcaacgaaaattgggaactcaaatatattatgtggcata
cgagcagaattagctaaaccgcgtgcctctacgcctctggccgggtatattgtacctaat
gttgacatgtcatttacttcattttcaaagtctgcagcaacaagtaacaatcaaaatgtt
gccgaaatattagaatgctttatttatcggatattgaatgaatcacattgcttaaaatta
gaagacttatgcatacaccctggaaaactggtctggtgcctttacatagacataattggc
ttggaggtggatggtggtgtatttgatgcttcaattttagcctgcgcctcagcactgagc
acactgaaattacctaaagttacatatgacgagaaaagtggaaaaatagagataggtgaa
gaaatgaaggagttgcatttagatattttccccgttgttagcacttacagcattttcgac
aacgttgtgttggtggatcccacttatcgagaggagagtatttcaaatgcagtatttcat
ctcggcgtgcacgaagacaccgttggtctatttcataaaagtggcggagtgccaatttca
gtaaaagaaattcaacattcgataaaaaacgctgtaaaacgtgaacaagagatttcaagt
ctattaagaagtttgaaaagtaataaataa
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