Ceratitis capitata (Mediterranean fruit fly): 101457830
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Entry
101457830 CDS
T07533
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03030
DNA replication
ccat03410
Base excision repair
ccat03420
Nucleotide excision repair
ccat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101457830
03410 Base excision repair
101457830
03420 Nucleotide excision repair
101457830
03430 Mismatch repair
101457830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccat03032
]
101457830
03400 DNA repair and recombination proteins [BR:
ccat03400
]
101457830
DNA replication proteins [BR:
ccat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101457830
DNA repair and recombination proteins [BR:
ccat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101457830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
AAA_14
RuvB_N
nSTAND3
PTCB-BRCT
AAA_30
RCF1-5-like_lid
AAA_33
BRCT_2
AAA_5
AAA_16
AAA_7
AAA_18
AAA_17
Motif
Other DBs
NCBI-GeneID:
101457830
NCBI-ProteinID:
XP_004536997
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MQRDIRSFYKTAGQPKKVEASKDDEELQNSKQKKRTARVISSDEDEVLESSRAKGTPAKK
KRISEKSPRENKPQNKKPSLSKLKSTPTKNLKPVDPNSLFGGETLRIEAKKPPPPKVEAA
KELEDDEIDKSLMEVDLDESIKIAKEQQIKTPEKGYSKSKTPHKSPRKEDSTPSNKEKKV
DKVASKKANQEKEHLNEDKVDNAQTKTEKKKEKSTPKAKKKQHEDLESSILSDEDRHERK
RMSAILYQKYKNRASVINPGCKEVPKGTPNCLAGLTFLITGVLESLERDEAASIIKELGG
KMMTTVGKRLNYLIVGEEAGPKKLVQAEEFGVHVLSEDGLLDLIREKSGDLPKKGVKEEK
GNELIAVSKSPHKKKNKNHVEEQNPKDNFTKQNENTEKDAKKSKNTVKIETSGRIETGLK
QLSSPTEDTKVNVKIEIKNNDLIESSVEVKQKVDDTMLPWVDKYKPMNLNEIVGQFGPSS
NVSKLKNWLSKWYINHDGKKKLQKPNPWAKNDDGSFYKAALLSGPPGIGKTTTATLVCKE
LGFDTVEFNASDTRSKRLLKEEVAELLSNKSLYGYFHGQGKTVTKKHVLLMDEVDGMAGN
EDRGGIQELIALIKDSSVPIICMCNDRNHQKMRSLVNYCYDLRFNKPRMQQIKGRILSIC
CKEGFKIDNDKVEEIIEATNNDIRQSINHISLLSAGKHLKLPSKNGNGISKTAEKDLKMG
PWEVVRKVFSADEHKKMSLNDKCDLFFQDYSLGPLFVQQNYLQVSPQGSKSDIPSKVALT
ADALSLGDLVDKRIRSNSAWSLLPTQSVFSSVLPGEYMSGNFIGQINFPGWLGKNSRNSK
RSRLAQEIHDHTRLRTSASRQSIRLDYAPFLLEKIVRPLRDLGMEGVKPSLDVLKEYHLL
REDIDALVELTTWPGKKGPMEAVDGRVKAALTRTYNKEVLAYAYSANVGVKKKKSEANDE
NELYGEDGEEVGDAAQSDEDDDKIENDGLIKARKHSDKATTSKAKPSSMAKTTGSGTTNK
KSTSKASSTKTKK
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtgacataagatctttctataaaactgctggtcaaccaaagaaagtggaagct
tccaaggatgatgaggaattgcagaatagtaagcagaagaaacgaactgccagagttatt
tcgagtgatgaagatgaagtattagagagttctcgagctaaaggaacacccgcaaagaaa
aaacgtatatcagaaaaatctccacgcgagaataaaccgcaaaataaaaaaccatcacta
tcaaaattaaaaagcaccccaacaaaaaatctaaagccagttgatcccaattcactcttt
ggtggggaaaccttacgtattgaagctaagaaaccgccgcctccaaaggtagaggcagca
aaagagttggaggatgacgaaatcgacaaaagtctcatggaagttgatctggacgagagt
ataaaaatagccaaagaacagcaaatcaaaacgccagagaaagggtattccaaatcaaaa
actccacataaaagtccccgtaaagaggacagtacgccaagtaataaggagaaaaaagtc
gacaaagtcgcatcaaagaaagctaatcaagaaaaagaacatctcaacgaagataaagtt
gacaatgcacaaactaaaactgagaaaaaaaaggaaaaaagtacaccgaaagccaagaag
aagcaacacgaagacttggaaagcagtattctgtcggacgaagatcgtcatgaacgcaaa
cgtatgtcggccattctttaccagaagtataaaaatcgtgcgagtgttataaatccagga
tgtaaggaagtcccaaagggcacaccgaattgcctagctggactaacgttcctcattact
ggagtgttggaatcgcttgaacgcgatgaagcggcctcaataataaaagagttgggtggt
aaaatgatgactaccgtgggtaaaagactaaactacttaattgttggtgaggaagcaggc
ccaaagaaattggtgcaagcagaagaatttggtgtgcatgttttaagtgaagatggcctc
ctcgacttaattagagaaaaatcaggggacctcccaaagaaaggagtaaaggaagaaaag
gggaatgagctaatcgcggtaagtaagagcccccataagaagaaaaataaaaatcacgtt
gaagagcaaaatccaaaagataactttacaaaacaaaacgaaaatactgaaaaagatgcc
aagaaaagtaaaaatactgttaagatcgagacctcgggaagaattgaaacagggcttaag
caacttagttctccaaccgaagacaccaaagtaaatgtaaaaatagaaataaaaaataac
gatttaatagaaagcagcgttgaagtaaaacagaaagtggatgacacaatgcttccatgg
gtagacaaatataaaccaatgaatctgaatgaaattgttggacaattcggaccatctagt
aatgtctcaaagttgaaaaactggctttctaagtggtatattaaccatgatggcaaaaag
aaactccaaaaaccaaatccttgggctaaaaatgatgacggtagcttttataaagcagca
ttgctatcaggacctcctggaattggtaaaactaccacggctactctagtttgcaaggaa
ttgggttttgacacagttgagttcaatgcatcagatacgcgcagcaagcggcttctgaag
gaagaagtagctgaactcttatccaataaatctctctacggctactttcatggtcaaggt
aaaacagtaaccaaaaagcatgtacttctaatggacgaagtcgatggaatggctggtaat
gaggatcgaggtggaattcaggaactaattgcattgataaaagattcttcagtgccaatt
atttgcatgtgtaatgatcgtaatcatcaaaaaatgcgttcacttgtcaactattgctat
gatctgcgtttcaataaaccgcgaatgcaacagatcaagggacgcattttaagtatatgt
tgtaaagaaggattcaagattgataacgataaggtggaggaaataattgaagcaacgaat
aatgatatacgtcaatcgataaatcatatttcactattgagcgctggcaagcatttgaaa
ctgccatctaagaacggaaatggtattagcaaaacggcggagaaagacttgaaaatgggt
ccttgggaggtagtgcgcaaagtattttccgcagatgagcataagaagatgtcgctaaat
gataaatgtgatttattttttcaagattacagcttgggaccattgtttgttcaacaaaat
tatttgcaagtgtcaccacagggttccaagtcagatattccatctaaggttgctcttaca
gctgatgctttaagtttgggtgatttagtagacaagcgcatacgttccaattccgcttgg
tctctgctaccgacacaatcggtgtttagttcagtattgcctggggaatacatgagtggt
aacttcattggacaaataaatttccctggctggttgggcaaaaattcacggaatagcaaa
cgaagtcgtctagctcaagaaattcatgaccacactcgtttacgaacttctgcctcgcgt
caatccatacgccttgactatgcaccgtttttattagaaaaaatcgtacgcccactaagg
gatttggggatggaaggagtaaaaccgtcactggacgtactgaaagaataccatttgctg
cgagaggatattgatgctctggtcgagcttacaacttggcccggcaagaaggggcctatg
gaagcagtagatgggcgtgtaaaagcggccttaactcgcacttataataaggaagtgctt
gcatatgcgtattctgcaaatgtaggagttaagaagaaaaaatcggaggcaaatgatgaa
aatgagctgtatggcgaggacggcgaggaagtaggcgatgctgcacagtcagatgaggat
gatgataaaattgaaaacgatggtttaattaaggcaaggaaacattctgataaagccaca
acatcgaaagctaaaccatcttcaatggccaaaacaactggaagtggtactacaaataaa
aaatctacatctaaagcgtcttccacaaaaacaaagaagtaa
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