KEGG   Ceratitis capitata (Mediterranean fruit fly): 101457891
Entry
101457891         CDS       T07533                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
ccat  Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03018  RNA degradation
ccat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101457891
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101457891
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccat03019]
    101457891
   03041 Spliceosome [BR:ccat03041]
    101457891
Messenger RNA biogenesis [BR:ccat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     101457891
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     101457891
Spliceosome [BR:ccat03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    101457891
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 101457891
NCBI-ProteinID: XP_004519359
UniProt: A0A811UE99
LinkDB
Position
Unknown
AA seq 145 aa
MLPLTLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY
VRGSTIKYLRIPDEVIDMVKDDAQAKARMRSEMNKGRVGAGSQNQNVRGQLRPRYKNTPQ
NGLKSGSRGPINRPLSQAGVNKTRK
NT seq 438 nt   +upstreamnt  +downstreamnt
atgctccctcttacattattaaagacagctcaaagccatcctatgttggtagaactaaaa
aatggtgagacgtacaacggacatttggttagctgtgattcatggatgaatataaatctt
cgagatgttatttgtacatcaaaggacggagacagattttggcggatgcctgaatgctat
gtacgaggcagtacaattaaatacctacgaatcccagatgaagttattgatatggtgaag
gacgatgcacaagcgaaggcaagaatgcgttccgaaatgaataaaggaagagtaggagct
gggtcccaaaaccaaaacgttagaggacagcttcgcccacgttataagaatacaccacaa
aacggcttgaaaagtggctctcgtggtccaattaaccgtcctctttctcaagccggtgtc
aataaaactagaaaatga

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