Ceratitis capitata (Mediterranean fruit fly): 101457900
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Entry
101457900 CDS
T07533
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccat03041
]
101457900
03016 Transfer RNA biogenesis [BR:
ccat03016
]
101457900
Enzymes [BR:
ccat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101457900
Spliceosome [BR:
ccat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101457900
Transfer RNA biogenesis [BR:
ccat03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
101457900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101457900
NCBI-ProteinID:
XP_004522326
UniProt:
A0A811V6P9
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MTAFEEFGVLPEIAKAIDDMEWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLRDLEEGKVSKSAGAGGSIAPWTMSFFDRGSALAVTPDGLRCQSREFKEWHGC
RATTGVHGKGQFYFEATVTDEGLCRVGWSTQQANLDLGTCRNGYGFGGTGKKSNNRQFDD
YGEAFGKNDVIGCFLDLQRFEISFAKNGKNLGIAFRIPENQRKETFYPSVVLKNAEMLFN
FGKTEFKNPPKDGFIAVALAGPERSKSNPLASPATNAAASKPAPNAPQAIIIEPSRELAE
QTYNQIEKFRVHLSNPDVRSLLLIGGVKLEQQKSALQQGVHIVVGTPGRLEEMISSGFVQ
LTHCRFFVLDEADALLKQGYTDLIDRLHKQIPKMTSDGRRLQMVVCSATLHAFEVKKMAD
RLMHFPTWVDLKGEDAVPETVHHVVCMVDPQKDTSWSNLRQHIRTDGVHSRDNISPQNHT
PETFSEAVKRLKGEYCIAAIEQHKMDRAIIFCRTKLDCDNLENYFKSRGGQRYSCVCLHG
DRRPQERKQNLETFKREQVKFLICTDVAARGLDITGLPFMINVTLPDEKSNYVHRIGRVG
RAERMGLAISLVATVPEKVWYHGEWCATRGRNCQNTNLTDVRGCCIWYNEMNLLADIEDH
LNITIQQVDKSLDVPINDFDGKVVYGQKNINTGTGYKDHVQQLGPVVQKLTDLELKAQSL
FLKRLKF
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttttgaagagtttggtgttttgccagaaatagccaaggcaattgacgacatg
gaatggactctacccacggacgttcaagccgaagcaataccacttattcttggtggtggt
gatgttctgatggccgcagaaactggttcaggtaaaaccggtgctttctgcttaccaatt
ttacaaatagtgtgggaaacattacgagatcttgaagagggtaaagtgagtaagtctgcg
ggagcaggaggaagtattgccccgtggacgatgtcattctttgatcgtggttcagcactt
gctgtgacaccagatggcctgcgttgtcaatctcgagaatttaaagaatggcacggttgc
cgagcaacaaccggtgttcacggaaaaggtcaattttattttgaagcgaccgttacggac
gaaggtctttgtcgagttggttggtctacacaacaagcgaatttagatcttggcacttgt
cgtaatggttacggatttggtggtacaggaaaaaagtccaataatcgtcaatttgacgac
tatggcgaagcatttgggaaaaacgatgttattggctgtttcctcgatctacaacgtttt
gaaatatcttttgctaagaatggaaaaaatcttgggatagcctttcgaataccagaaaat
cagcgcaaagaaactttttatccatcagtagtattaaaaaatgctgaaatgttgtttaat
tttgggaagacagaattcaaaaatcctccaaaagatggcttcattgctgttgctttagct
ggaccagaacgttccaaatcgaatccgctcgcaagtcccgcaactaacgccgcggcgagt
aaacctgctccaaacgcaccccaggcaattattattgaaccaagtcgtgagttggcagag
caaacctataatcaaatcgaaaagtttcgagtgcatttaagtaacccagatgttcgttcc
ctcttacttattggaggtgttaaactagagcaacagaaaagtgctcttcaacaaggtgta
catattgttgttggtacacctggtcggctcgaagaaatgattagtagtggatttgtgcag
ttaactcattgcagattttttgtattggacgaagctgacgctctacttaaacaaggctac
actgatttaattgatcgtctacataagcaaattccaaaaatgacctcagatggtcgtcgt
ttacagatggtagtttgctccgcaacactacatgcgtttgaggtgaaaaagatggctgat
cgtttaatgcactttcccacttgggtagatcttaagggtgaagatgcagttcccgaaaca
gtacatcatgtagtttgtatggtagatccacaaaaggatacatcctggagtaatctccga
caacacatacgaaccgatggcgtacacagtcgtgataatataagtccccaaaatcataca
cccgaaacattttcggaggccgttaaacgtctaaaaggcgaatattgcattgcggcaatt
gagcagcataaaatggatagagcaataatattttgtcgcaccaaattggattgcgacaat
ttggaaaattatttcaaatcccgtggtggacaacgatattcatgcgtttgcctgcatggt
gatcgcagaccacaagaacgcaagcagaatttggaaacgtttaaacgtgagcaagtgaaa
tttctcatttgtactgatgtggcggcaaggggattagatataactggtctacctttcatg
attaacgttactttgccggatgagaagtcaaattatgtacaccgtattggccgtgttgga
cgtgcagagcgtatgggcttggctattagtttggtggccacagtgccagaaaaagtttgg
taccatggtgaatggtgtgcaacaagaggccgaaattgccaaaatacaaatttgactgac
gtgcgtggttgttgtatttggtataatgaaatgaatttattggctgatatagaggatcac
ctcaacattaccattcaacaagttgataagtctttggatgtaccaataaatgatttcgat
ggaaaagttgtgtatggccagaaaaatataaataccggaactggttataaagatcatgtg
caacagttaggaccagttgtgcaaaaacttactgatcttgaactaaaggcacaatcttta
ttcttaaaacgtttaaaattttaa
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