Ceratitis capitata (Mediterranean fruit fly): 101457958
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Entry
101457958 CDS
T07533
Name
(RefSeq) pre-mRNA-splicing factor SYF1 isoform X1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101457958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccat03019
]
101457958
03041 Spliceosome [BR:
ccat03041
]
101457958
Messenger RNA biogenesis [BR:
ccat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101457958
Spliceosome [BR:
ccat03041
]
Complex B
Other components
Prp19-related factors
101457958
Complex C
101457958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_12
TPR_2
Mad3_BUB1_I
TPR_15
TPR_8
TPR_10
PPR
ARM_TT21_C
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
101457958
NCBI-ProteinID:
XP_023159394
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MTLIDKPLITVDIDFPEEDVPYEEEILRNAYSVKHWLRYIEHKSKAPNCGVNIVYERALK
ELPGSYKIWYNYLRTRRKQVRGRPLNDPMYDEVNNTFERALVFMHKMPRIWMDYGVFMTG
QCRITRTRHLFDRALRALPITQHHRIWPLYLKFVRRFDIPETAVRIYRRYLKLCPEDAEV
YIEYLTEVERLDEAAQQLASVVDNENFVSKHGKSNHQLWNELCDLISKNPDKVHSLNVDA
IIRSGLRRYTDQLGHLWNSLADYYVRSGLFDRARDIYEEAIQTVTTVRDFTQVFDEYAQF
EEVSLNKRMEMVANDPHATEEDDIDVELRLARFEYLMERRLLLLNSVLLRQNPHNVHEWH
KRVKLYEGKPHEIINTYTEAVQTVQPKLAAGKLHTLWVEFAKFYESNSQVEDARVVFERG
TEVEYVKVEDLAAVWCEWAEMEIRQENFEGALRLMQKATAMPKRKVAYHDDTETVQMRLY
RSLKVWSMYADLEESFGTFKTCKAVYDRIIDLKICTPQIIINYGLFLEEHNYFEEAFRAY
EKGIALFKWPNVFDIWNAYLTKFLKRYGGTKLERARDLFEQCLENCPPEHAKYFYLLYAK
LEEEHGLARHAMAVYDRATSAVKPEEMFDMYNIFIKKAAEIYGLPRTREIYEKAIEALPE
ENMRPMCVRFAEMETKLGEIDRARAIYAHCSQVCDPRITAEFWQTWKEFEVRHGNEDTMR
EMLRIKRSVQATYNTQVNMMAAQFLNQSGTNGAGAEAGGDAMRLLEAKAAAEQQARQQQT
LKPQTSGNIMFVRGETQGGKAKDKVVNPDEIDIGESDEEDDDDEDDGDDDEGAAGNGGAD
ATKRGGNEENVIAAKRLRIEQQAIPAKVFGGLKKPTNDDEQEAD
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgacactcattgataagccgttaattacagtggatatcgattttcccgaggaagatgtg
ccctatgaggaggagattttgcgtaatgcatattccgtgaaacattggctacgctatatc
gaacataaatccaaggctcccaattgtggcgtcaatattgtctatgaacgtgcactgaaa
gagctgcccggcagttataaaatttggtacaactatttacgtacacgtcgcaagcaagtg
cgtggacgtccgctcaatgatcccatgtatgacgaagttaataatacatttgaaagagca
ttagtatttatgcataaaatgccacgtatatggatggattacggtgtatttatgacggga
cagtgccgtatcacacgtactaggcatttgttcgatcgtgctttacgcgctttgcccata
acacaacatcatcgtatttggccgctttatttgaaattcgtacgacgctttgatataccc
gaaacagctgtacgtatctacagacgttatctgaaattgtgtccagaagatgctgaggtg
tacatagagtatttaacggaagtagaacgcttggatgaagcagcacaacagttggcatca
gtggttgacaatgagaatttcgtatcgaagcatggcaaatcgaatcatcagttatggaat
gagttgtgtgatttaatttcgaagaacccagacaaagttcactcattgaatgtggatgca
ataatacgtagtggtttgaggcggtacactgatcagttgggtcatttatggaactcttta
gcagattactatgtgcgttcaggtttattcgatcgcgcacgggatatttacgaagaagcc
atacagaccgtaacaacagtgcgtgattttacgcaagttttcgacgagtacgcacagttt
gaggaggtatcattgaataaacgcatggaaatggtcgcaaacgatccgcatgctaccgaa
gaagatgacattgatgtggaattacgtttggcacgcttcgaatatctcatggagcgacgt
ctattactgctaaatagtgtgctattgcgacagaatccacataacgtgcatgaatggcat
aagcgtgttaagctgtatgaaggcaagccacacgaaataattaatacatacacagaagca
gtgcagacggtacaaccaaagcttgcggccggcaaactacatacattgtgggtggaattt
gcaaagttttacgagtccaatagccaggtagaggatgcgcgtgtggtatttgaacgcggc
accgaggttgagtatgtgaaagtagaagatttagcagcagtttggtgtgagtgggccgaa
atggagataaggcaggagaatttcgaaggcgctttacgtttgatgcagaaagccactgca
atgcccaagcgaaaagtggcttatcatgacgacactgaaaccgtgcaaatgcgtctttat
cgttcacttaaagtttggtccatgtacgccgacttggaggaatccttcggcaccttcaaa
acctgcaaagctgtttatgatcgtataattgatttgaaaatttgtacaccacaaataatc
attaactatggcctctttctggaggagcacaactattttgaggaagcatttcgtgcatat
gagaaaggcattgcgctatttaaatggccaaatgtatttgatatttggaatgcgtatttg
acaaagtttcttaaacgttatggtggcacgaaattggaacgtgctcgcgatctattcgaa
caatgtttggaaaattgtccaccagaacatgctaaatacttttatttactctacgcaaaa
ttggaagaggaacacggtttggcacgccatgctatggccgtttatgatcgggcaacaagc
gctgttaagcccgaagagatgtttgatatgtataatatattcataaagaaagcggcagag
atttatggtttaccgcgtactcgtgaaatctacgagaaggctattgaagctttgcccgag
gagaatatgcgaccgatgtgtgtgcgttttgcggaaatggaaacgaaattgggcgaaatc
gatcgcgcgcgtgcaatttacgcacattgttcgcaggtttgtgatccacgcataaccgct
gaattttggcaaacctggaaagagttcgaagtacgtcatggcaatgaggatacgatgcgt
gaaatgttgcgcatcaaacgctcggtgcaagctacctacaatacccaggtgaatatgatg
gctgcacaatttctcaatcaatcgggcacaaatggcgccggcgccgaagctggtggcgat
gcaatgcgtctgctggaggccaaagcggcagccgagcaacaggcacgtcaacaacaaacg
cttaagccacaaactagcggtaatattatgtttgtgcgtggcgaaacgcaaggtggcaaa
gccaaggataaagtggttaatcccgatgaaattgacattggagagagtgatgaggaagat
gatgatgatgaggacgacggcgatgatgacgagggtgctgctggtaatggtggtgctgac
gcgacaaagcgtggcggaaatgaagagaatgtaattgcagccaaaagattacgcattgag
caacaagccataccggcgaaggtgtttggcggtttaaagaagcccacaaacgatgatgag
caggaagcagattga
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integrated database retrieval system
